RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TRADDQ15628 312 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 CRTC2Q53ET0 693 aaPredicted RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 RBM20Q5T481 1227 aaKnown RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 UGT3A1Q6NUS8 523 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 RAB42Q8N4Z0 105 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 ZUFSPQ96AP4 578 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 FAM114A2Q9NRY5 505 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 TSR3Q9UJK0 312 aaKnown RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 CROTQ9UKG9 612 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 PCDHGA6Q9Y5G7 932 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 KALRNO60229 2985 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 EIF3HO15372 352 aaKnown RBP eCLIP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 TUBB4AP04350 444 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 DLSTP36957 453 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 ITGA1P56199 1179 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 CKAP4Q07065 602 aaKnown RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 MGAT5Q09328 741 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 SF1Q15637 639 aaKnown RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 CYS1Q717R9 158 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 ZBED8Q8IZ13 594 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 OR2A1Q8NGT9 310 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 EEF1AKMT1Q8WVE0 214 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 TRMT6Q9UJA5 497 aaKnown RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 CORO1CQ9ULV4 474 aaPredicted RBP19.28■□□□□ 0.68
TMEM53-205ENST00000372244 KLHL20Q9Y2M5 609 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 VWA7Q9Y334 891 aa19.28■□□□□ 0.68
TMEM53-205ENST00000372244 SNRNP200O75643 2136 aaKnown RBP19.27■□□□□ 0.68
TMEM53-205ENST00000372244 ZNF891A8MT65 544 aaPredicted RBP19.27■□□□□ 0.67
TMEM53-205ENST00000372244 TARM1B6A8C7 271 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 NKX2-8O15522 239 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.67
TMEM53-205ENST00000372244 MAGP20916 626 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 MCM3P25205 808 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 OAS2P29728 719 aaKnown RBP19.27■□□□□ 0.67
TMEM53-205ENST00000372244 RORAP35398 523 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 HSD17B2P37059 387 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 CAV1Q03135 178 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 GPS2Q13227 327 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 FASTKQ14296 549 aaKnown RBP19.27■□□□□ 0.67
TMEM53-205ENST00000372244 WHAMMP3Q1A5X7 153 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 LINC00303Q3SY05 128 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 FCRL6Q6DN72 434 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 FIGLAQ6QHK4 219 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 PAQR3Q6TCH7 311 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 TAX1BP1Q86VP1 789 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 CPNE9Q8IYJ1 553 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 PYROXD1Q8WU10 500 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 PKP4Q99569 1192 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 RAB17Q9H0T7 212 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 KCND3Q9UK17 655 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 PSAT1Q9Y617 370 aa19.27■□□□□ 0.67
TMEM53-205ENST00000372244 C21orf140B9A014 251 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 MEN1O00255 615 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 ZBTB14O43829 449 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 RECKO95980 971 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 TCN2P20062 427 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 GRIA3P42263 894 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 LRRC8EQ6NSJ5 796 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 FAM199XQ6PEV8 388 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-205ENST00000372244 DSELQ8IZU8 1212 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 OR2L3Q8NG85 312 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 CT55Q8WUE5 264 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 SMPDL3AQ92484 453 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 SEC14L1Q92503 715 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 SLC39A7Q92504 469 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 DLG3Q92796 817 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 MCMBPQ9BTE3 642 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 GPR87Q9BY21 358 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 FAM117AQ9C073 453 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 SPRTNQ9H040 489 aaPredicted RBP19.26■□□□□ 0.67
TMEM53-205ENST00000372244 ENAMQ9NRM1 1142 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 PLCL2Q9UPR0 1127 aa19.26■□□□□ 0.67
TMEM53-205ENST00000372244 E7EQ34 232 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 ZNF749O43361 778 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 TSPAN12O95859 305 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 SLC16A8O95907 504 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 KLK3P07288 261 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 CTSBP07858 339 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 CYP2A7P20853 494 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 PLTPP55058 493 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 MC1RQ01726 317 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 TBR1Q16650 682 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 HECTD2Q5U5R9 776 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 PIWIL4Q7Z3Z4 852 aaKnown RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 SLC26A11Q86WA9 606 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 ZC3HC1Q86WB0 502 aaKnown RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 MCATQ8IVS2 390 aaKnown RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 GPR135Q8IZ08 494 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 FBXO25Q8TCJ0 367 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 STARD8Q92502 1023 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 PHACTR1Q9C0D0 580 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 ACTR5Q9H9F9 607 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 SAYSD1Q9NPB0 183 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 PCMTD2Q9NV79 361 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 INTS7Q9NVH2 962 aaKnown RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 EURLQ9NYK6 297 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.25■□□□□ 0.67
TMEM53-205ENST00000372244 ZFATQ9P243 1243 aa19.25■□□□□ 0.67
TMEM53-205ENST00000372244 MRPS18BQ9Y676 258 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms