RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 WASF2Q9Y6W5 498 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 E7ENX8 843 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C9P02748 559 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 LIMK2P53671 638 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAPK12P53778 367 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SEMA3AQ14563 771 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CAND1Q86VP6 1230 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 BANPQ8N9N5 519 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 TCTEX1D2Q8WW35 142 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PRICKLE1Q96MT3 831 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 GRHL1Q9NZI5 618 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 IGSF9Q9P2J2 1179 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 TEX46H3BTG2 121 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 GPR32O75388 356 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 FABP3P05413 133 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 TYRP14679 529 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 JUNDP17535 347 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 FECHP22830 423 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CDKL1Q00532 357 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 WDR45BQ5MNZ6 344 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C12orf65Q9H3J6 166 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 WRBO00258 174 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CLDN9O95484 217 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C8GP07360 202 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 FAUP35544 74 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRIF1Q5T3J3 769 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PIK3R3Q92569 461 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 NODALQ96S42 347 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SUCOQ9UBS9 1254 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CA5BQ9Y2D0 317 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 A0A075B6Q4 140 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ELOVL7A1L3X0 281 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CENPBD1B2RD01 187 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PIRO00625 290 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ESR1P03372 595 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 IL18Q14116 193 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ARL13AQ5H913 290 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CPTPQ5TA50 214 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 MED27Q6P2C8 311 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C10orf82Q8WW14 230 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 NXNL1Q96CM4 212 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 MCMBPQ9BTE3 642 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ATG10Q9H0Y0 220 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ADAMTS10Q9H324 1103 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CLDN4O14493 209 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CHST10O43529 356 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 TNFP01375 233 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC35G6P0C7Q6 338 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 CCNFP41002 786 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 BUD31P41223 144 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 GHRHRQ02643 423 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C21orf62-AS1Q17RA5 79 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 VPS26BQ4G0F5 336 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 RAB11FIP2Q7L804 512 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 AMZ2Q86W34 360 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 SIDT2Q8NBJ9 832 aaKnown RBP13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ALG2Q9H553 416 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 GAREM1Q9H706 876 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAT2BQ9NZL9 334 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 FNIP2Q9P278 1114 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 PCDHGB3Q9Y5G1 929 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
RAPGEF1-201ENST00000372189 MYH2Q9UKX2 1941 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC28A2O43868 658 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 PLIN3O60664 434 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 CNMDO75829 334 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 GABBR2O75899 941 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HCAR3P49019 387 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 FOXM1Q08050 763 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 BRAT1Q6PJG6 821 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RAB2BQ8WUD1 216 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 MFSD3Q96ES6 412 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 BTBD1Q9H0C5 482 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RASSF1Q9NS23 344 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 MED11Q9P086 117 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 POMPQ9Y244 141 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 HOXB2P14652 356 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAGP20916 626 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAGEA3P43357 314 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 RGS19P49795 217 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SCN1BQ07699 218 aa13.04□□□□□ -0.32
RAPGEF1-201ENST00000372189 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms