RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TIMP2P16035 220 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 CDK9P50750 372 aaKnown RBP28.15■■■□□ 2.1
SSBP3-204ENST00000371320 ESRRGP62508 458 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 CHIT1Q13231 466 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 DAG1Q14118 895 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 NKG7Q16617 165 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 PRAMEF9Q5VWM5 478 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 STK32CQ86UX6 486 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 CLEC4FQ8N1N0 589 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 TMEM132CQ8N3T6 1108 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 OR52E4Q8NGH9 312 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 NCLNQ969V3 563 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 MAGEB10Q96LZ2 347 aaPredicted RBP28.15■■■□□ 2.1
SSBP3-204ENST00000371320 CPPED1Q9BRF8 314 aaPredicted RBP28.15■■■□□ 2.1
SSBP3-204ENST00000371320 RIOK2Q9BVS4 552 aaKnown RBP28.15■■■□□ 2.1
SSBP3-204ENST00000371320 FAM8A1Q9UBU6 413 aa28.15■■■□□ 2.1
SSBP3-204ENST00000371320 LAMA2P24043 3122 aaKnown RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 OR2AG2A6NM03 316 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 C16orf96A6NNT2 1141 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 UPK3BL1B0FP48 263 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 UPK3BL2E5RIL1 263 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 NNMTP40261 264 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 PFN3P60673 137 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 ZNF648Q5T619 568 aaPredicted RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 CYP2U1Q7Z449 544 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 ANKRD46Q86W74 232 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 TRAM1L1Q8N609 369 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 CLP1Q92989 425 aaKnown RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 TESCQ96BS2 214 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 FBXL8Q96CD0 374 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 FAM120BQ96EK7 910 aaKnown RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 AURKBQ96GD4 344 aaPredicted RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 APOLD1Q96LR9 279 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 INPP5KQ9BT40 448 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 HPS4Q9NQG7 708 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 DDX18Q9NVP1 670 aaKnown RBP28.14■■■□□ 2.1
SSBP3-204ENST00000371320 DNAJB9Q9UBS3 223 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 PPT2Q9UMR5 302 aa28.14■■■□□ 2.1
SSBP3-204ENST00000371320 FAM220BPB1ANY3 271 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 GSNP06396 782 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 ZDHHC13Q8IUH4 622 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 DDHD1Q8NEL9 900 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 SDCCAG3Q96C92 435 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 TIFAQ96CG3 184 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 HIC2Q96JB3 615 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 IRAK3Q9Y616 596 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 WNT6Q9Y6F9 365 aa28.14■■■□□ 2.09
SSBP3-204ENST00000371320 NPIPB8E9PQR5 432 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 CLGNO14967 610 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 PRKD3O94806 890 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 LRATO95237 230 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 CST1P01037 141 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 ALPLP05186 524 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 JUPP14923 745 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 PCSK2P16519 638 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 AMD1P17707 334 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 XPAP23025 273 aaPredicted RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 PCSK6P29122 969 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 NRIP1P48552 1158 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 HTRA4P83105 476 aaPredicted RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 PLCL1Q15111 1095 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 ZNF77Q15935 545 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 ZIK1Q3SY52 487 aaPredicted RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 GPR141Q7Z602 305 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 CALHM3Q86XJ0 350 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 MRPL43Q8N983 215 aaKnown RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 ADAMTS16Q8TE57 1224 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 PAWRQ96IZ0 340 aaKnown RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 MRGPRX3Q96LB0 322 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 ZSCAN5AQ9BUG6 496 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 RAD18Q9NS91 495 aa28.13■■■□□ 2.09
SSBP3-204ENST00000371320 MAGED1Q9Y5V3 778 aaPredicted RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 MKI67P46013 3256 aaKnown RBP28.13■■■□□ 2.09
SSBP3-204ENST00000371320 SERTM1A2A2V5 107 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 FADS2P1A8MWK0 482 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 CREG1O75629 220 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 TRMUO75648 421 aaKnown RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 SLCO2B1O94956 709 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 TCF3P15923 654 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 MAP4P27816 1152 aaKnown RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 IRF8Q02556 426 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 TMEM259Q4ZIN3 620 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 HENMT1Q5T8I9 393 aaKnown RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 KIAA0907Q7Z7F0 614 aaPredicted RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 GPR149Q86SP6 731 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 DCAF13Q9NV06 445 aaKnown RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 G3V2T6 193 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 KIAA0355O15063 1070 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 RETP07949 1114 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 THRBP10828 461 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 ABRQ12979 859 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 KCNC3Q14003 757 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 PON2Q15165 354 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 NOXRED1Q6NXP6 359 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 GPR180Q86V85 440 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 EGLN2Q96KS0 407 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 YTHDF1Q9BYJ9 559 aaKnown RBP28.12■■■□□ 2.09
SSBP3-204ENST00000371320 C11orf49Q9H6J7 331 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 IL36AQ9UHA7 158 aa28.12■■■□□ 2.09
SSBP3-204ENST00000371320 TSPAN11A1L157 253 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms