RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 NFATC3Q12968 1075 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 CAPRIN1Q14444 709 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 METTL2BQ6P1Q9 378 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 GALNT18Q6P9A2 607 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 ETFBKMTQ8IXQ9 262 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ZNF786Q8N393 782 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 MINDY1Q8N5J2 469 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 HOPXQ9BPY8 73 aaPredicted RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 HEBP1Q9NRV9 189 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 C16orf96A6NNT2 1141 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 AKAP10O43572 662 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 NUAK1O60285 661 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 RSL1D1O76021 490 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 SLC6A2P23975 617 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 TRAP1Q12931 704 aaKnown RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 RFTN2Q52LD8 501 aaPredicted RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 PAGE3Q5JUK9 113 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
GPC3-201ENST00000370818 ASB11Q8WXH4 323 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ALPK1Q96QP1 1244 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 CIB1Q99828 191 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 SLC12A9Q9BXP2 914 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ZIM2Q9NZV7 527 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 DPP7Q9UHL4 492 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
GPC3-201ENST00000370818 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 PRRT4C9JH25 899 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 GNAO1P09471 354 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 PIK3CGP48736 1102 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 CCT8P50990 548 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 EMX2Q04743 252 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 MTX3Q5HYI7 312 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 FAM78AQ5JUQ0 283 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 DPPA4Q7L190 304 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 TECPR1Q7Z6L1 1165 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 CHCHD4Q8N4Q1 142 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 TERB1Q8NA31 727 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 NTMT1Q9BV86 223 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 KLHL25Q9H0H3 589 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 PARVBQ9HBI1 364 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 FARSBQ9NSD9 589 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 CMTM6Q9NX76 183 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ARL15Q9NXU5 204 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 DAPK2Q9UIK4 370 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 FFAR3O14843 346 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ANKRD28O15084 1053 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 GPR42O15529 346 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 STK16O75716 305 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ADH1CP00326 375 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ANXA5P08758 320 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 G6PDP11413 515 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 EPB42P16452 691 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 MMP12P39900 470 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 METAP1P53582 386 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 MLLT10P55197 1068 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 KCNK10P57789 538 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 RHDQ02161 417 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 GPM6BQ13491 265 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 BOP1Q14137 746 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 NR6A1Q15406 480 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 GAB4Q2WGN9 574 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 ZNF648Q5T619 568 aaPredicted RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 PDE12Q6L8Q7 609 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 UBE2R2Q712K3 238 aaPredicted RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 OSBPL10Q9BXB5 764 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 TRIM8Q9BZR9 551 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
GPC3-201ENST00000370818 ITM2BQ9Y287 266 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 IFT52Q9Y366 437 aa12.48□□□□□ -0.41
GPC3-201ENST00000370818 EEDO75530 441 aaKnown RBP12.47□□□□□ -0.41
GPC3-201ENST00000370818 EBLN1P0CF75 366 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 CKMT2P17540 419 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 GGT5P36269 586 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 SLC6A11P48066 632 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 POLR2JP52435 117 aaKnown RBP12.47□□□□□ -0.41
GPC3-201ENST00000370818 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
GPC3-201ENST00000370818 SELENBP1Q13228 472 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 TIGD2Q4W5G0 525 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 CDKL4Q5MAI5 379 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
GPC3-201ENST00000370818 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms