RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 BORCS6Q96GS4 357 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 CHCHD6Q9BRQ6 235 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 SLC35A5Q9BS91 424 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 DERL2Q9GZP9 239 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 ABCB9Q9NP78 766 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 GALPQ9UBC7 116 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 RBM7Q9Y580 266 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 AQP12BA6NM10 295 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 CLCNKAP51800 687 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 CILP2Q8IUL8 1156 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 AQP12AQ8IXF9 295 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 TP53INP1Q96A56 240 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 LRP6O75581 1613 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 LEFTY2O00292 366 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 SLC7A1P30825 629 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 CCT3P49368 545 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 STC1P52823 247 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 TARDBPQ13148 414 aaKnown RBP eCLIP19.22■□□□□ 0.67
LMO4-202ENST00000370544 LCN1P1Q5VSP4 162 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 THUMPD1Q9NXG2 353 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 SRPRAP08240 638 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 GHRHRQ02643 423 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 SLC18A2Q05940 514 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 LAPTM4BQ86VI4 370 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 PDPRQ8NCN5 879 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 FEM1AQ9BSK4 669 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 ADAP2Q9NPF8 381 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 ZCCHC3Q9NUD5 404 aaKnown RBP19.22■□□□□ 0.67
LMO4-202ENST00000370544 TAC3Q9UHF0 121 aa19.22■□□□□ 0.67
LMO4-202ENST00000370544 KLF11O14901 512 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 S100GP29377 79 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 GRK6P43250 576 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 GANABQ14697 944 aaKnown RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 ACSBG2Q5FVE4 666 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 SLC8B1Q6J4K2 584 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 GRASPQ7Z6J2 395 aaPredicted RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 C1orf52Q8N6N3 182 aaKnown RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 ASB9Q96DX5 294 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 CMTM7Q96FZ5 175 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 FZD4Q9ULV1 537 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 PRMT3O60678 531 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 MMP20O60882 483 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 CPSF4LA6NMK7 179 aaKnown RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 ZNF487B1APH4 448 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 AIREO43918 545 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 CHRNA1P02708 482 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 CSNK2A2P19784 350 aaPredicted RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 OR4F6Q8NGB9 312 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 JSRP1Q96MG2 331 aaPredicted RBP19.21■□□□□ 0.67
LMO4-202ENST00000370544 SPATA7Q9P0W8 599 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 GABRQQ9UN88 632 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 DUXAA6NLW8 204 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 B4DGG1 531 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 TMEM150CB9EJG8 249 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 DGKEP52429 567 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 TCEAL1Q15170 157 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 ZCCHC12Q6PEW1 402 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 TIFABQ6ZNK6 161 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 DIRAS2Q96HU8 199 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 IFT27Q9BW83 186 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 TVP23BQ9NYZ1 205 aa19.21■□□□□ 0.67
LMO4-202ENST00000370544 CBFA2T3O75081 653 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 POP7O75817 140 aaKnown RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 PFKMP08237 780 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 ENGP17813 658 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 PPP2R2BQ00005 443 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 AMZ1Q400G9 498 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 KCTD8Q6ZWB6 473 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 NATD1Q8N6N6 113 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 LMO3Q8TAP4 145 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 NLE1Q9NVX2 485 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 SLC7A8Q9UHI5 535 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 NDUFS4O43181 175 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 PAPSS2O95340 614 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 DSTNP60981 165 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 MYBPC3Q14896 1274 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 ZNF776Q68DI1 518 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 OR4F3Q6IEY1 312 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 NAT14Q8WUY8 206 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 XYLT2Q9H1B5 865 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 DSN1Q9H410 356 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 ATXN10Q9UBB4 475 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 MANBAO00462 879 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 TFECO14948 347 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 ARPC2O15144 300 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 ERI3O43414 337 aaKnown RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 TNFP01375 233 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 KLK1P06870 262 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 CTSOP43234 321 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 DNASE1L1P49184 302 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 UBAP2Q5T6F2 1119 aaKnown RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 BICRALQ6AI39 1079 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 USP30Q70CQ3 517 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 ZNF483Q8TF39 744 aaPredicted RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 CGREF1Q99674 301 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 SMG9Q9H0W8 520 aaKnown RBP19.2■□□□□ 0.66
LMO4-202ENST00000370544 VRTNQ9H8Y1 702 aa19.2■□□□□ 0.66
LMO4-202ENST00000370544 TIMMDC1Q9NPL8 285 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms