RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PKP2Q99959 881 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CNPY3Q9BT09 278 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CACNA2D2Q9NY47 1150 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NUDT5Q9UKK9 219 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ACSL6Q9UKU0 697 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 FAM237BA0A1B0GVD1 139 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 A0A1W2PPM1 405 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 TAF4O00268 1085 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CTDSP2O14595 271 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 TOR1AO14656 332 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 GIPC1O14908 333 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NCAM2O15394 837 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CLDN11O75508 207 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 PIAS1O75925 651 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ACADMP11310 421 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 PCSK2P16519 638 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 EPHA3P29320 983 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ARL4AP40617 200 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CPA2P48052 419 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 HLCSP50747 726 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 OVGP1Q12889 678 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 TFDP2Q14188 446 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 MFSD13AQ14CX5 517 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 AGAP6Q5VW22 663 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NCEH1Q6PIU2 408 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CORO6Q6QEF8 472 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NPNTQ6UXI9 565 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 USP51Q70EK9 711 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ZC3H7AQ8IWR0 971 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NDUFAF2Q8N183 169 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 TXNDC5Q8NBS9 432 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 AGAP4Q96P64 663 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ACAT2Q9BWD1 397 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 PRDM8Q9NQV8 689 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ZC3H7BQ9UGR2 993 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF175Q9Y473 711 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 A8MU76 341 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 E7ESA3 106 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 KCNN4O15554 427 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CSPG5O95196 566 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SNAPINO95295 136 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ECDO95905 644 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MBL2P11226 248 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ITGB7P26010 798 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RBL1P28749 1068 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CD68P34810 354 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 HSD17B2P37059 387 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 GP5P40197 560 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SULT1E1P49888 294 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RBM20Q5T481 1227 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 XKRXQ6PP77 449 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 TMEM26Q6ZUK4 368 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 NRROSQ86YC3 692 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 IL17RDQ8NFM7 739 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PCDH19Q8TAB3 1148 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 TFB1MQ8WVM0 346 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PIH1D2Q8WWB5 315 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CNDP1Q96KN2 507 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 BOCQ9BWV1 1114 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 TMEM168Q9H0V1 697 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PCDH12Q9NPG4 1184 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MKL2Q9ULH7 1088 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MAPRE3Q9UPY8 281 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MRPS17Q9Y2R5 130 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 R4GN57 208 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 C2orf81A6NN90 581 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MEI4A8MW99 385 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 UGT2B11O75310 529 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 BMP2P12643 396 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF182P17025 639 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 KDELR1P24390 212 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 IL12AP29459 219 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CYP4F2P78329 520 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 GPLD1P80108 840 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RHAGQ02094 409 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CYP4F3Q08477 520 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ILF2Q12905 390 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RALGPS1Q5JS13 557 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 EOGTQ5NDL2 527 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ARHGAP36Q6ZRI8 547 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SORCS1Q8WY21 1168 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CSF3RQ99062 836 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 SIK2Q9H0K1 926 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 RAD21L1Q9H4I0 556 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ACSS3Q9H6R3 686 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 UCK1Q9HA47 277 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 PPP1R14DQ9NXH3 145 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 B3GNT2Q9NY97 397 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MBD2Q9UBB5 411 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 NAALAD2Q9Y3Q0 740 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 LOC285095A0A1B0GVY8 99 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 KLF8O95600 359 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-204ENST00000369530 F9P00740 461 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 ACVR2AP27037 513 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 CDKN2BP42772 138 aa6.7□□□□□ -1.34
CSDE1-204ENST00000369530 MAGEA3P43357 314 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms