RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CYP2A13Q16696 494 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 TJAP1Q5JTD0 557 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 NXNQ6DKJ4 435 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 HOMEZQ8IX15 550 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 CCT7Q99832 543 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 TCEAL2Q9H3H9 227 aaPredicted RBP23.15■■□□□ 1.3
SNX3-203ENST00000368979 TM9SF3Q9HD45 589 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 ARMCX1Q9P291 453 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 POLG2Q9UHN1 485 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 HEBP2Q9Y5Z4 205 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 CEP192Q8TEP8 1941 aa23.15■■□□□ 1.3
SNX3-203ENST00000368979 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 CAPN14A8MX76 684 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 UGDHO60701 494 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 LINC00032P0C843 101 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 FNTBP49356 437 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 ILF3Q12906 894 aaKnown RBP eCLIP23.14■■□□□ 1.3
SNX3-203ENST00000368979 UBAP2LQ14157 1087 aaKnown RBP23.14■■□□□ 1.3
SNX3-203ENST00000368979 KRT72Q14CN4 511 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 SLC30A9Q6PML9 568 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 WDR5BQ86VZ2 330 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 TMEFF1Q8IYR6 380 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 PHACTR4Q8IZ21 702 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 LMNTD1Q8N9Z9 388 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 DNASE2BQ8WZ79 361 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 MAGEB10Q96LZ2 347 aaPredicted RBP23.14■■□□□ 1.3
SNX3-203ENST00000368979 CAMK1GQ96NX5 476 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 ZNF385DQ9H6B1 395 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 CAAP1Q9H8G2 361 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 CCDC177Q9NQR7 707 aaPredicted RBP23.14■■□□□ 1.3
SNX3-203ENST00000368979 LNPEPQ9UIQ6 1025 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 SLC12A4Q9UP95 1085 aa23.14■■□□□ 1.3
SNX3-203ENST00000368979 ATP6AP2A0A1C7CYW4 349 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 E7EQ34 232 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 ATP6AP2O75787 350 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 WFS1O76024 890 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 NCF2P19878 526 aaPredicted RBP23.13■■□□□ 1.29
SNX3-203ENST00000368979 CCND1P24385 295 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 CHIT1Q13231 466 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 E2F2Q14209 437 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 TCEA2Q15560 299 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 TMEM198Q66K66 360 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 LAYNQ6UX15 382 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 CHSY3Q70JA7 882 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 GSDMCQ9BYG8 508 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 AKTIPQ9H8T0 292 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 PFDN4Q9NQP4 134 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 ZNF839A8K0R7 811 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 VPS4BO75351 444 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 PRR35P0CG20 571 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 F3P13726 295 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 NPPBP16860 134 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 BLKP51451 505 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 TBCCQ15814 346 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 ZNF542PQ5EBM4 170 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 LIPJQ5W064 366 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 MYLK4Q86YV6 388 aaPredicted RBP23.13■■□□□ 1.29
SNX3-203ENST00000368979 TREML1Q86YW5 311 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 USP7Q93009 1102 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 MIPEPQ99797 713 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 MIR1-1HGQ9H1L0 117 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 KCNE2Q9Y6J6 123 aa23.13■■□□□ 1.29
SNX3-203ENST00000368979 TMEM221A6NGB7 291 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 M0R296 226 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 TLR4O00206 839 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 FFAR3O14843 346 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 CLGNO14967 610 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 GPR42O15529 346 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 LAMTOR5O43504 91 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 JUPP14923 745 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 IRF8Q02556 426 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 IL27RAQ6UWB1 636 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 SCIMPQ6UWF3 145 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 SUSD1Q6UWL2 747 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 LCTLQ6UWM7 567 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 CPSF7Q8N684 471 aaKnown RBP23.12■■□□□ 1.29
SNX3-203ENST00000368979 OR2T11Q8NH01 316 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 SETD7Q8WTS6 366 aaKnown RBP23.12■■□□□ 1.29
SNX3-203ENST00000368979 CATSPER2Q96P56 530 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 NRTNQ99748 197 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 RAB11FIP5Q9BXF6 653 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 KIR3DX1Q9H7L2 352 aa23.12■■□□□ 1.29
SNX3-203ENST00000368979 PRR5-ARHGAP8B1AHC4 643 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 MANBAO00462 879 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 T-ENOLP0DO92 83 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 GNAZP19086 355 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 CD22P20273 847 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 PKLRP30613 574 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 CASP2P42575 452 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 KRT33BQ14525 404 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 ABRAXAS2Q15018 415 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 CPSF6Q16630 551 aaKnown RBP eCLIP23.11■■□□□ 1.29
SNX3-203ENST00000368979 XKR6Q5GH73 641 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 PRAMEF14Q5SWL7 426 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 PRAMEF13Q5VWM6 474 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 MAML2Q8IZL2 1156 aaPredicted RBP23.11■■□□□ 1.29
SNX3-203ENST00000368979 RAB42Q8N4Z0 105 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 OR52E1Q8NGJ3 308 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 HMGCLL1Q8TB92 370 aa23.11■■□□□ 1.29
SNX3-203ENST00000368979 NEIL2Q969S2 332 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms