RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ACTR1BP42025 376 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 RASSF2P50749 326 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 ACTR1AP61163 376 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 FASTKQ14296 549 aaKnown RBP18.85■□□□□ 0.61
CHTOP-204ENST00000368694 GRB7Q14451 532 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 ABRAXAS2Q15018 415 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 XKR7Q5GH72 579 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 XKR6Q5GH73 641 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 THEMIS2Q5TEJ8 643 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 KLHDC8AQ8IYD2 350 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 CCL4L1Q8NHW4 92 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 PTCD3Q96EY7 689 aaKnown RBP18.85■□□□□ 0.61
CHTOP-204ENST00000368694 KLHDC7BQ96G42 594 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 NECAB3Q96P71 396 aaPredicted RBP18.85■□□□□ 0.61
CHTOP-204ENST00000368694 IER2Q9BTL4 223 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 SLC29A3Q9BZD2 475 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 CCDC177Q9NQR7 707 aaPredicted RBP18.85■□□□□ 0.61
CHTOP-204ENST00000368694 TAGLN3Q9UI15 199 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 COPG1Q9Y678 874 aaKnown RBP18.85■□□□□ 0.61
CHTOP-204ENST00000368694 KCNE2Q9Y6J6 123 aa18.85■□□□□ 0.61
CHTOP-204ENST00000368694 MEI4A8MW99 385 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 E7ENX8 843 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 K7ESF4 209 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 MAP3K13O43283 966 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 PEX11AO75192 247 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 ULK1O75385 1050 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 CD27P26842 260 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 TAP2Q03519 686 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 KLF10Q13118 480 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 USP39Q53GS9 565 aaKnown RBP18.84■□□□□ 0.61
CHTOP-204ENST00000368694 SGO1Q5FBB7 561 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 C2orf73Q8N5S3 287 aaPredicted RBP18.84■□□□□ 0.61
CHTOP-204ENST00000368694 CADM4Q8NFZ8 388 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 KLHL29Q96CT2 875 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 ORAI3Q9BRQ5 295 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
CHTOP-204ENST00000368694 ZNF490Q9ULM2 529 aaPredicted RBP18.84■□□□□ 0.61
CHTOP-204ENST00000368694 SPTY2D1-AS1A0A0U1RR47 76 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 MGRN1O60291 552 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 TNFP01375 233 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 KRT6AP02538 564 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 KRT6BP04259 564 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 LBPP18428 481 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 GNAZP19086 355 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 CPA2P48052 419 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 KRT6CP48668 564 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 GGTA1PQ4G0N0 100 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 CHSY3Q70JA7 882 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 RAB42Q8N4Z0 105 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 POU5F2Q8N7G0 328 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 L3MBTL4Q8NA19 623 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 OR2T11Q8NH01 316 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 N4BP2L2Q92802 583 aaPredicted RBP18.83■□□□□ 0.61
CHTOP-204ENST00000368694 MTFMTQ96DP5 389 aaKnown RBP18.83■□□□□ 0.61
CHTOP-204ENST00000368694 PCED1AQ9H1Q7 454 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 ELOVL6Q9H5J4 265 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 ZNF385DQ9H6B1 395 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 FARSBQ9NSD9 589 aaKnown RBP18.83■□□□□ 0.61
CHTOP-204ENST00000368694 SNX6Q9UNH7 406 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 DYRK1BQ9Y463 629 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 DNAH14Q0VDD8 3507 aa18.83■□□□□ 0.61
CHTOP-204ENST00000368694 PI15O43692 258 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 HNRNPCL1O60812 293 aaKnown RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 MAOBP27338 520 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 SIGLEC14Q08ET2 396 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 ZNF542PQ5EBM4 170 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 CWF19L1Q69YN2 538 aaKnown RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 CPSF7Q8N684 471 aaKnown RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 NEIL2Q969S2 332 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 CMTM5Q96DZ9 223 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 MAGEB10Q96LZ2 347 aaPredicted RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 HSPA12BQ96MM6 686 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 SGPP1Q9BX95 441 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 MIR1-1HGQ9H1L0 117 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 SPATA6Q9NWH7 488 aaPredicted RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 TRNAU1APQ9NX07 287 aaKnown RBP18.83■□□□□ 0.6
CHTOP-204ENST00000368694 DGKBQ9Y6T7 804 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 PCM1Q15154 2024 aa18.83■□□□□ 0.6
CHTOP-204ENST00000368694 USP34Q70CQ2 3546 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 MANBAO00462 879 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 UGDHO60701 494 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 PRAMEF4O60810 478 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 ALDOCP09972 364 aaKnown RBP18.82■□□□□ 0.6
CHTOP-204ENST00000368694 CCND1P24385 295 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 STX1BP61266 288 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 ILF3Q12906 894 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHTOP-204ENST00000368694 ARHGAP19Q14CB8 494 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 NR6A1Q15406 480 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 ZRSR2Q15696 482 aaKnown RBP18.82■□□□□ 0.6
CHTOP-204ENST00000368694 RPE65Q16518 533 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 IMPG1Q17R60 797 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 KIF19Q2TAC6 998 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 ATP6AP1LQ52LC2 224 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 PRAMEF9Q5VWM5 478 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 LIPJQ5W064 366 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 SLC36A4Q6YBV0 504 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 TMPRSS11BQ86T26 416 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 HOMEZQ8IX15 550 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 FAM174AQ8TBP5 190 aa18.82■□□□□ 0.6
CHTOP-204ENST00000368694 NRTNQ99748 197 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms