RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SUCOQ9UBS9 1254 aaKnown RBP10.4□□□□□ -0.74
TPM3-212ENST00000368533 ITGB1BP2Q9UKP3 347 aa10.4□□□□□ -0.74
TPM3-212ENST00000368533 H7C0S8 307 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 MID1O15344 667 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 LZTS3O60299 673 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 SNX2O60749 519 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 PCDH8O95206 1070 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 WISP3O95389 354 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 ESR1P03372 595 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 ALDOCP09972 364 aaKnown RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 VIPR1P32241 457 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 NEK2P51955 445 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 TSTA3Q13630 321 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 DMC1Q14565 340 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 NEDD8Q15843 81 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 INAQ16352 499 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 RBBP7Q16576 425 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 BRAT1Q6PJG6 821 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 KIAA0907Q7Z7F0 614 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 CLIP4Q8N3C7 705 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 DNAJB14Q8TBM8 379 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 CHPT1Q8WUD6 406 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 CAPSLQ8WWF8 208 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 OR8D1Q8WZ84 308 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 PYCR2Q96C36 320 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 FAM129BQ96TA1 746 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 TCF12Q99081 682 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 LMAN2LQ9H0V9 348 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 S1PR5Q9H228 398 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 EPS8L2Q9H6S3 715 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 SYTL2Q9HCH5 934 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 DYRK4Q9NR20 520 aa10.4□□□□□ -0.75
TPM3-212ENST00000368533 OAS3Q9Y6K5 1087 aaKnown RBP10.4□□□□□ -0.75
TPM3-212ENST00000368533 A0A1W2PP55 124 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 FAM47E-STBD1D6RA91 191 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CFAP99D6REC4 459 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 SULT1C4O75897 302 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CCR7P32248 378 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 HSPA7P48741 367 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CTSCP53634 463 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 RPL26P61254 145 aaKnown RBP10.39□□□□□ -0.75
TPM3-212ENST00000368533 PLIN5Q00G26 463 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CNTN1Q12860 1018 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 SPIDRQ14159 915 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 PON2Q15165 354 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 RAET1GQ6H3X3 334 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CRTC3Q6UUV7 619 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 LIPIQ6XZB0 460 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 LARP4Q71RC2 724 aaKnown RBP eCLIP10.39□□□□□ -0.751e-8■□□□□ 9.3
TPM3-212ENST00000368533 GPSM1Q86YR5 675 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 ALDH16A1Q8IZ83 802 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 VPS33AQ96AX1 596 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 PRSS16Q9NQE7 514 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 POLE4Q9NR33 117 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 MRGBPQ9NV56 204 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 PKD2L2Q9NZM6 624 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 GNPTGQ9UJJ9 305 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 NDUFAF1Q9Y375 327 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 SPINT1O43278 529 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 NR4A2P43354 598 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 TPTEP56180 551 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 ESRRGP62508 458 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 DSG4Q86SJ6 1040 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 OR52B6Q8NGF0 335 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 STAG3L4Q8TBR4 150 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 KCNJ9Q92806 393 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 HGH1Q9BTY7 390 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 C1orf50Q9BV19 199 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 GID8Q9NWU2 228 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 ZMYM5Q9UJ78 669 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 RIMKLBQ9ULI2 386 aa10.39□□□□□ -0.75
TPM3-212ENST00000368533 CNOT6Q9ULM6 557 aaKnown RBP10.39□□□□□ -0.75
TPM3-212ENST00000368533 NUP210Q8TEM1 1887 aaPredicted RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 ANKRD34BA5PLL1 514 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 GUCY1B2O75343 617 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 RECQL5O94762 991 aaPredicted RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 LBPP18428 481 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 DIO3P55073 304 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 FCHO2Q0JRZ9 810 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ITPRIPL2Q3MIP1 535 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ANKRD26P1Q6NSI1 321 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ERAP2Q6P179 960 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 Q7L0L9 218 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 IGFN1Q86VF2 1251 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 FUNDC1Q8IVP5 155 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ZBTB2Q8N680 514 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ELMO1Q92556 727 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CDCA3Q99618 268 aaPredicted RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 NRTNQ99748 197 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 FZD3Q9NPG1 666 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 SLC27A6Q9Y2P4 619 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 MTCH2Q9Y6C9 303 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 STON1Q9Y6Q2 735 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 TRIM64CA6NLI5 447 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms