RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FAM174BQ3ZCQ3 159 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 USP39Q53GS9 565 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 C6orf52Q5T4I8 152 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 MBOAT1Q6ZNC8 495 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 RFLNAQ6ZTI6 216 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CHERPQ8IWX8 916 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 NAT16Q8N8M0 369 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 NAT14Q8WUY8 206 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 SCAMP4Q969E2 229 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 FRG2BQ96QU4 278 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CCM2Q9BSQ5 444 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 HAUS8Q9BT25 410 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ANKRD60Q9BZ19 345 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ACPTQ9BZG2 426 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 EDDM13A0A1B0GTR0 161 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CLPTM1O96005 669 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 PDYNP01213 254 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CTSLP07711 333 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ANXA6P08133 673 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 BCKDHAP12694 445 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 EPORP19235 508 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ITGB7P26010 798 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 HNF4AP41235 474 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 PRKCQQ04759 706 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 PTGR1Q14914 329 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ACOX1Q15067 660 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 NRF1Q16656 503 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 LRRC73Q5JTD7 316 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 RNF220Q5VTB9 566 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 GLYATQ6IB77 296 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 FBXO15Q8NCQ5 510 aaPredicted RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 OR8D1Q8WZ84 308 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 GTF2H4Q92759 462 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 HLA-CQ95604 372 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 AP2M1Q96CW1 435 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ZNF514Q96K75 400 aaPredicted RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 PPM1MQ96MI6 270 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 OR52E6Q96RD3 313 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 UGT2B28Q9BY64 529 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 GORASP2Q9H8Y8 452 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ZFP14Q9HCL3 533 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 FARSBQ9NSD9 589 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 PNPLA3Q9NST1 481 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 MAN2B2Q9Y2E5 1009 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CROCCQ5TZA2 2017 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 SGTAO43765 313 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 RASAL1O95294 804 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 LDLRP01130 860 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 GGT1P19440 569 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 CARM1Q86X55 608 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 OR2T12Q8NG77 320 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 BPIFB1Q8TDL5 484 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 ITCHQ96J02 903 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 TMEM74Q96NL1 305 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 MYADMQ96S97 322 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 P2RY13Q9BPV8 354 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 YIPF3Q9GZM5 350 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 ABCG8Q9H221 673 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 KCNH6Q9H252 994 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 BRF2Q9HAW0 419 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 SLAMF8Q9P0V8 285 aa13.63□□□□□ -0.23
USF1-202ENST00000368020 A0A096LPI6 279 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 RNF103-CHMP3A0A140T963 221 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 H3BQ06 376 aaPredicted RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 CLGNO14967 610 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 GSTA4O15217 222 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 DEAF1O75398 565 aaPredicted RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 SCELO95171 688 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 RAP2AP10114 183 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 PRPS1L1P21108 318 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 PAX7P23759 505 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 FCARP24071 287 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 S100A3P33764 101 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 HALP42357 657 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 DGKQP52824 942 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 IRF8Q02556 426 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 TMEM115Q12893 351 aaPredicted RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 ABRQ12979 859 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 ELAVL3Q14576 367 aaKnown RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
USF1-202ENST00000368020 BCL7AQ4VC05 210 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
USF1-202ENST00000368020 PARS2Q7L3T8 475 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms