RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 M0QX08 132 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SLC16A6O15403 523 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 GABARAPO95166 117 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SCELO95171 688 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 FKBP9O95302 570 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 APBB3O95704 486 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 CKMP06732 381 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ITGAMP11215 1152 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 MTHFD1P11586 935 aaKnown RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 PFKLP17858 780 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 MSH3P20585 1137 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 EEF1DP29692 281 aaKnown RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 SHMT2P34897 504 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 GRK3P35626 688 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 POLR2IP36954 125 aaKnown RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 MPLP40238 635 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 OPRD1P41143 372 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ARSDP51689 593 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 PLA2G16P53816 162 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 FOXA1P55317 472 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SHC2P98077 582 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 PPP2R2BQ00005 443 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 MVKQ03426 396 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 DMC1Q14565 340 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 PFKFB4Q16877 469 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 RABL3Q5HYI8 236 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 PAGE3Q5JUK9 113 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SIRPB2Q5JXA9 342 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 AGAP7PQ5VUJ5 663 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 EGFLAMQ63HQ2 1017 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 GALNT18Q6P9A2 607 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 RPS27LQ71UM5 84 aaKnown RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SCN4BQ8IWT1 228 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 KIAA1958Q8N8K9 716 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SCAIQ8N9R8 606 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 CHDHQ8NE62 594 aaPredicted RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 OR6P1Q8NGX9 317 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SH3RF2Q8TEC5 729 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 TMBIM1Q969X1 311 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 VPS33AQ96AX1 596 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SH3YL1Q96HL8 342 aaPredicted RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 MUS81Q96NY9 551 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SH3GL1Q99961 368 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 TTLL2Q9BWV7 592 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ZYG11BQ9C0D3 744 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 NAA50Q9GZZ1 169 aaKnown RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 LHPPQ9H008 270 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SMOC1Q9H4F8 434 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 IL1RL2Q9HB29 575 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SP110Q9HB58 689 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 TAS2R13Q9NYV9 303 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
USF1-201ENST00000368019 C3orf18Q9UK00 162 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 RNF112Q9ULX5 631 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 CPQQ9Y646 472 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 HS3ST4Q9Y661 456 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 CEP192Q8TEP8 1941 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ZZEF1O43149 2961 aa11.26□□□□□ -0.61
USF1-201ENST00000368019 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 SUPT3HB4E1H0 165 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 K7EQS6 105 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 PFDN6O15212 129 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 ADAM23O75077 832 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 NDST3O95803 873 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 LINC00032P0C843 101 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 CES1P23141 567 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 BDNFP23560 247 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 RPL10P27635 214 aaKnown RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 CD86P42081 329 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 HALP42357 657 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 RAD23AP54725 363 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 PCSK7Q16549 785 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 PARP15Q460N3 678 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 CCDC92Q53HC0 331 aaPredicted RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 C6orf136Q5SQH8 315 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 DLEU7Q6UYE1 221 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 GPRIN3Q6ZVF9 776 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 PRSS48Q7RTY5 328 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 GLB1L3Q8NCI6 653 aaPredicted RBP11.25□□□□□ -0.61
USF1-201ENST00000368019 SETD9Q8NE22 299 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 OR52K2Q8NGK3 314 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 OR4L1Q8NH43 312 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 OR5K1Q8NHB7 308 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 SLC35B4Q969S0 331 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 TBATAQ96M53 351 aa11.25□□□□□ -0.61
USF1-201ENST00000368019 RNF145Q96MT1 663 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms