RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 FAR1Q8WVX9 515 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 HDAC10Q969S8 669 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 FKBP10Q96AY3 582 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 THOC3Q96J01 351 aaKnown RBP11.87□□□□□ -0.51
LINC00449-201ENST00000366259 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.87□□□□□ -0.51
LINC00449-201ENST00000366259 STOX2Q9P2F5 926 aaPredicted RBP11.87□□□□□ -0.51
LINC00449-201ENST00000366259 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
LINC00449-201ENST00000366259 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 ZFHX3Q15911 3703 aa11.87□□□□□ -0.51
LINC00449-201ENST00000366259 F8P00451 2351 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 CCDC168Q8NDH2 2452 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 KRT87PA6NCN2 255 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 ONECUT2O95948 504 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 GOT2P00505 430 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 ALBP02768 609 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 CD9P21926 228 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 TSFMP43897 325 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 NAP1L1P55209 391 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 SEMA3AQ14563 771 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 SPA17Q15506 151 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 ZRSR2Q15696 482 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 RBBP7Q16576 425 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 DNAJC21Q5F1R6 531 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 SLC22A15Q8IZD6 547 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 KRT222Q8N1A0 295 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 OR11G2Q8NGC1 345 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 MARVELD3Q96A59 401 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 NACC2Q96BF6 587 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 ZNF778Q96MU6 729 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 TMEM121Q9BTD3 319 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 UNKQ9C0B0 810 aaKnown RBP11.86□□□□□ -0.51
LINC00449-201ENST00000366259 LHPPQ9H008 270 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 SLC26A1Q9H2B4 701 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 WDR54Q9H977 334 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 CPAMD8Q8IZJ3 1885 aa11.86□□□□□ -0.51
LINC00449-201ENST00000366259 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 TCRBV7S2A1N4TA0A589 114 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 KDM1AO60341 852 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 NRP2O60462 931 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 CTSVO60911 334 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 GPC4O75487 556 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 PIM1P11309 404 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 EDN3P14138 238 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 PSMB5P28074 263 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 CYLC1P35663 651 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 GRIA1P42261 906 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 VSX2P58304 361 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 PLOD1Q02809 727 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 SRSF11Q05519 484 aaKnown RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 SF1Q15637 639 aaKnown RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 IRAK1BP1Q5VVH5 260 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 LDB1Q86U70 411 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 FJX1Q86VR8 437 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 CCDC170Q8IYT3 715 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 AMER2Q8N7J2 671 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 DNAAF3Q8N9W5 541 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 OR2L8Q8NGY9 312 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 C8orf44Q96CB5 159 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 SELENOSQ9BQE4 189 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 EPS8L2Q9H6S3 715 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 LUC7LQ9NQ29 371 aaKnown RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
LINC00449-201ENST00000366259 SCN3AQ9NY46 2000 aa11.85□□□□□ -0.51
LINC00449-201ENST00000366259 GTF3C1Q12789 2109 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 SOWAHDA6NJG2 315 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 VSTM2BA6NLU5 285 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 PSMD3O43242 534 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 PRICKLE3O43900 615 aaPredicted RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 S1PR4O95977 384 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 POU3F2P20265 443 aaPredicted RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 CETN2P41208 172 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 PER3P56645 1201 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 KCNK10P57789 538 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 KLC1Q07866 573 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 GRM7Q14831 915 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 TLR1Q15399 786 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 CCSMST1Q4G0I0 132 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 ZC3H12BQ5HYM0 836 aaKnown RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 TSTD2Q5T7W7 516 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 AFTPHQ6ULP2 937 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 ISLR2Q6UXK2 745 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 DCUN1D3Q8IWE4 304 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 SLC34A3Q8N130 599 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 LRRC57Q8N9N7 239 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 TTC29Q8NA56 475 aaPredicted RBP11.84□□□□□ -0.51
LINC00449-201ENST00000366259 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
LINC00449-201ENST00000366259 OR4L1Q8NH43 312 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms