RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 KRT19P08727 400 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CDH1P12830 882 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 PLA2G2AP14555 144 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MAGP20916 626 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TMPRSS3P57727 454 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 BPIFB3P59826 476 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 CDC20Q12834 499 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SLC12A1Q13621 1099 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 USP10Q14694 798 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 ANO4Q32M45 955 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CERCAMQ5T4B2 595 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TTC23LQ6PF05 361 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 KCNMB4Q86W47 210 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 UNC93AQ86WB7 457 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TP53INP2Q8IXH6 220 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ADGRG2Q8IZP9 1017 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 PSMA8Q8TAA3 256 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 P2RY11Q96G91 374 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TNIP3Q96KP6 325 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 EGLN2Q96KS0 407 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GPR78Q96P69 363 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CSPG4P5Q96PW8 444 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SLC30A3Q99726 388 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 LRRC40Q9H9A6 602 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MEAF6Q9HAF1 191 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 EIF2B3Q9NR50 452 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 FBXO8Q9NRD0 319 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 FAM49BQ9NUQ9 324 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 WSB2Q9NYS7 404 aaPredicted RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 ACTR3BQ9P1U1 418 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 BAG5Q9UL15 447 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 USP22Q9UPT9 525 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 THADAQ6YHU6 1953 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 DOCK6Q96HP0 2047 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TCRBV5S2A0A599 114 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TCRBV21S2A2A0A5A6 115 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ZNF840PA6NDX5 716 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 FXYD1O00168 92 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 NR5A2O00482 541 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MUSKO15146 869 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MDM4O15151 490 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 KMOO15229 486 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MFSD11O43934 449 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 GP1BAP07359 652 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ALDOCP09972 364 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 HOXB2P14652 356 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 PRKCAP17252 672 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 AGXTP21549 392 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 BCKDHBP21953 392 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 OSTNP61366 133 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 MEP1AQ16819 746 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CTU2Q2VPK5 515 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 PLEKHG6Q3KR16 790 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 HECTD3Q5T447 861 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SIGIRRQ6IA17 410 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CYHR1Q6ZMK1 362 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TMEM135Q86UB9 458 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 IFNEQ86WN2 208 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CEP97Q8IW35 865 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ZNF567Q8N184 647 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SEPHS2Q99611 448 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GPR22Q99680 433 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 TRIM15Q9C019 465 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 CYP4F12Q9HCS2 524 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SPHK2Q9NRA0 654 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 OLA1Q9NTK5 396 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 THAP10Q9P2Z0 257 aaPredicted RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 ABCD2Q9UBJ2 740 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GIMAP2Q9UG22 337 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ZNF639Q9UID6 485 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 FZD4Q9ULV1 537 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 H0YAE9 185 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 DYRK3O43781 588 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 NPHS1O60500 1241 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SNX2O60749 519 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 RFPL3O75679 317 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 HSD17B1P14061 328 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GOT1P17174 413 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 GABRG2P18507 467 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 IL12RB1P42701 662 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SEPHS1P49903 392 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 VBP1P61758 197 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 HIST2H2ACQ16777 129 aaPredicted RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 VPS26BQ4G0F5 336 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 LAIR2Q6ISS4 152 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 ZC3HC1Q86WB0 502 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 DCP2Q8IU60 420 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 LYSMD2Q8IV50 215 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 SLC22A15Q8IZD6 547 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 VPS33AQ96AX1 596 aa7.54□□□□□ -1.2
CCL28-201ENST00000361115 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
CCL28-201ENST00000361115 TSNARE1Q96NA8 513 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms