RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 KRT31Q15323 416 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 PLAC9Q5JTB6 97 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 MANEAQ5SRI9 462 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 C6orf141Q5SZD1 244 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 DUPD1Q68J44 220 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 SYT10Q6XYQ8 523 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 PIP4P1Q86T03 277 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 SRRM1Q8IYB3 904 aaKnown RBP1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 ACRBPQ8NEB7 543 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 TGS1Q96RS0 853 aaKnown RBP1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 RBM4BQ9BQ04 359 aaKnown RBP1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 BTBD10Q9BSF8 475 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 COL25A1Q9BXS0 654 aaPredicted RBP1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 RTN4RQ9BZR6 473 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 PCDH18Q9HCL0 1135 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF304Q9HCX3 659 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 ZNF212Q9UDV6 495 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 MKLN1Q9UL63 735 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 FRAS1Q86XX4 4008 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 DMXL2Q8TDJ6 3036 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 DOCK4Q8N1I0 1966 aa1.78□□□□□ -2.12
SMARCAD1-202ENST00000359052 CCDC169A6NNP5 214 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMCO5BA8MYB1 307 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 YY2O15391 372 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 GMDSO60547 372 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 B3GAT3O94766 335 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR2F2O95006 317 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 BAG3O95817 575 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 CHRM2P08172 466 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 SYPP08247 313 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 COX7A2P14406 83 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ENDOUP21128 410 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 AKT1P31749 480 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 HNRNPH1P31943 449 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 RPL21P46778 160 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARHGDIBP52566 201 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 SIRPAP78324 504 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 KIAA0141Q14154 515 aaPredicted RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZSCAN23Q3MJ62 389 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLC16A12Q6ZSM3 486 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ANO5Q75V66 913 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 KRT27Q7Z3Y8 459 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 MREGQ8N565 214 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARL10Q8N8L6 244 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 EIF1ADQ8N9N8 165 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 POC1AQ8NBT0 407 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 SOCS4Q8WXH5 440 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 CELF1Q92879 486 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ADIPOR1Q96A54 375 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 HMCESQ96FZ2 354 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 PDXPQ96GD0 296 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF317Q96PQ6 595 aaPredicted RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLITRK1Q96PX8 696 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 ELOVL1Q9BW60 279 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 TDRD1Q9BXT4 1180 aaKnown RBP1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 DCLK3Q9C098 648 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 MED20Q9H944 212 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 APMAPQ9HDC9 416 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 MYNNQ9NPC7 610 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 CATSPERZQ9NTU4 200 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 TCP11L1Q9NUJ3 509 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 KCNK6Q9Y257 313 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 PCDH11XQ9BZA7 1347 aa1.78□□□□□ -2.13
SMARCAD1-202ENST00000359052 LOC102723971A0A1B0GUV8 181 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ANKRD61A6NGH8 418 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 JAK2O60674 1132 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BMP4P12644 408 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CYP2A7P20853 494 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 U2AF2P26368 475 aaKnown RBP eCLIP1.77□□□□□ -2.137e-7■□□□□ 9.2
SMARCAD1-202ENST00000359052 FCGR2BP31994 310 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 IER3P46695 156 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 HAAOP46952 286 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PLTPP55058 493 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TAS2R50P59544 299 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ROM1Q03395 351 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 OCA2Q04671 838 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PRKCQQ04759 706 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PSMD5Q16401 504 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PPP1R3AQ16821 1122 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TIGD6Q17RP2 521 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PRTGQ2VWP7 1150 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BOLA3Q53S33 107 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TOR1AIP1Q5JTV8 583 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NT5DC1Q5TFE4 455 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 AGAP6Q5VW22 663 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 KYAT3Q6YP21 454 aaKnown RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF551Q7Z340 670 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 BCORP1Q8N888 145 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PSD4Q8NDX1 1056 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MYCBPAPQ8TBZ2 947 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 CACNG8Q8WXS5 425 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 HDAC11Q96DB2 347 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 MYEOVQ96EZ4 313 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 ABHD8Q96I13 439 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 KLHL15Q96M94 604 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRERF1Q96PN7 1200 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TUBGCP5Q96RT8 1024 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 NUP85Q9BW27 656 aa1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 PARD6GQ9BYG4 376 aaPredicted RBP1.77□□□□□ -2.13
SMARCAD1-202ENST00000359052 TTYH3Q9C0H2 523 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms