RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 THUMPD1Q9NXG2 353 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 EIF2B4Q9UI10 523 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SRPRAP08240 638 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CXCR3P49682 368 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CAPN13Q6MZZ7 669 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MSANTD2Q6P1R3 559 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TMPRSS11BQ86T26 416 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 METTL25Q8N6Q8 603 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 OR4K2Q8NGD2 314 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF675Q8TD23 568 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF354BQ96LW1 612 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 DEFB129Q9H1M3 183 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 KIAA1217Q5T5P2 1943 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF536O15090 1300 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 H3BMQ9 156 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SMSP52788 366 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PFKPQ01813 784 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MPPE1Q53F39 396 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ZDHHC20Q5W0Z9 365 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TIFABQ6ZNK6 161 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 IRGQQ8WZA9 623 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM80Q96HE8 168 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 COG8Q96MW5 612 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 IL4I1Q96RQ9 567 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 COPS8Q99627 209 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 BARD1Q99728 777 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 CIPCQ9C0C6 399 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TM9SF3Q9HD45 589 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 KCTD5Q9NXV2 234 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 URADA6NGE7 173 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SNAP29O95721 258 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HOXC6P09630 235 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 FPR1P21462 350 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 LHCGRP22888 699 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 RPS12P25398 132 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HOXD10P28358 340 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ATP5C1P36542 298 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 HNRNPA0Q13151 305 aaKnown RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PTGR1Q14914 329 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 KIAA0930Q6ICG6 404 aaPredicted RBP8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PNCKQ6P2M8 343 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 TMC8Q8IU68 726 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ANKFN1Q8N957 763 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 PHC3Q8NDX5 983 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 LGALS12Q96DT0 336 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 MUS81Q96NY9 551 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 ABCB8Q9NUT2 735 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 IKZF2Q9UKS7 526 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 OR10H1Q9Y4A9 318 aa8.59□□□□□ -1.03
COL6A6-201ENST00000358511 UPK1BO75841 260 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PKMP14618 531 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CHMP24386 653 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MFSD10Q14728 455 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MOB2Q70IA6 237 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 OTOP3Q7RTS5 596 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SLC35B2Q8TB61 432 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 BIRC7Q96CA5 298 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MCMBPQ9BTE3 642 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 BEX2Q9BXY8 128 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SIX2Q9NPC8 291 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MS4A12Q9NXJ0 267 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 POLLQ9UGP5 575 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 A0A075B6Q4 140 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LRRN3E7EW58 273 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 INMT-MINDY4F8WBC2 141 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GSTM3P21266 225 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 DEDD2Q8WXF8 326 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 AZIN2Q96A70 460 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SLC7A6OSQ96CW6 309 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SCGB3A2Q96PL1 93 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 FUNDC2Q9BWH2 189 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 EBPLQ9BY08 206 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SLC25A51Q9H1U9 297 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LRRN3Q9H3W5 708 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CPSF4LA6NMK7 179 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 FANCGO15287 622 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 GRK5P34947 590 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 MAP2K3P46734 347 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 KANK2Q63ZY3 851 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TSPAN33Q86UF1 283 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 LINC00471Q8N535 108 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 HBEGFQ99075 208 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF471Q9BX82 626 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 TIGARQ9NQ88 270 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 XPNPEP1Q9NQW7 623 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 FARSBQ9NSD9 589 aaKnown RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CCM2LQ9NUG4 571 aaPredicted RBP8.58□□□□□ -1.04
COL6A6-201ENST00000358511 A8MX80 341 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PMM2O15305 246 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PCDH8O95206 1070 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 PRAMEF12O95522 483 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 ITPKAP23677 461 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 CRB2Q5IJ48 1285 aa8.58□□□□□ -1.04
COL6A6-201ENST00000358511 FAM198BQ6UWH4 519 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms