RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TDRKHQ9Y2W6 561 aaKnown RBP16.54■□□□□ 0.24
TPM1-205ENST00000357980 ARHGEF17Q96PE2 2063 aaPredicted RBP16.54■□□□□ 0.24
TPM1-205ENST00000357980 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 A0A1W2PR77 199 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 A6NCN8 305 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 VPS4BO75351 444 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 EML2O95834 649 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 HMOX2P30519 316 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 NCALDP61601 193 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 E2F2Q14209 437 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 ABRAXAS2Q15018 415 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 MFSD2AQ8NA29 543 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 USP7Q93009 1102 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 HSPA12BQ96MM6 686 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 NRTNQ99748 197 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 MVB12BQ9H7P6 319 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 CAAP1Q9H8G2 361 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 PFDN4Q9NQP4 134 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 IMP3Q9NV31 184 aaKnown RBP16.53■□□□□ 0.24
TPM1-205ENST00000357980 GPRC5BQ9NZH0 403 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 SPATA7Q9P0W8 599 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 BDP1A6H8Y1 2624 aa16.53■□□□□ 0.24
TPM1-205ENST00000357980 E7EQ34 232 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 FFAR3O14843 346 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 GPR42O15529 346 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 WNT1P04628 370 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 MTHFD1P11586 935 aaKnown RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 NPPBP16860 134 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 CD22P20273 847 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 HSD17B2P37059 387 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 ACTR1BP42025 376 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 ACTR1AP61163 376 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 CHIT1Q13231 466 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 TCEA2Q15560 299 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 SLC30A9Q6PML9 568 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 IL27RAQ6UWB1 636 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 Q6ZSR9 355 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 MYLK4Q86YV6 388 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 HOMEZQ8IX15 550 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 GPBAR1Q8TDU6 330 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 MARK4Q96L34 752 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 MAGEB10Q96LZ2 347 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 FERD3LQ96RJ6 166 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 TCEAL2Q9H3H9 227 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 ACTR5Q9H9F9 607 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 CCDC177Q9NQR7 707 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 PRMT8Q9NR22 394 aaPredicted RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 GIMAP2Q9UG22 337 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 CCL27Q9Y4X3 112 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 COPG1Q9Y678 874 aaKnown RBP16.52■□□□□ 0.24
TPM1-205ENST00000357980 NCOR1O75376 2440 aa16.52■□□□□ 0.24
TPM1-205ENST00000357980 USP34Q70CQ2 3546 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CCDC163A0A0D9SF12 145 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 MANBAO00462 879 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 ATP5HO75947 161 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 TNFP01375 233 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.23
TPM1-205ENST00000357980 TDGF1P13385 188 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 GNAZP19086 355 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CCND1P24385 295 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CD38P28907 300 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CASP2P42575 452 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 RACK1P63244 317 aaKnown RBP16.52■□□□□ 0.23
TPM1-205ENST00000357980 IRF8Q02556 426 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 KLF10Q13118 480 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.23
TPM1-205ENST00000357980 LIPJQ5W064 366 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 OGFOD2Q6N063 350 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 SUSD1Q6UWL2 747 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 TRIM46Q7Z4K8 759 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 IQCHQ86VS3 1027 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 PARGQ86W56 976 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 DCP2Q8IU60 420 aaKnown RBP16.52■□□□□ 0.23
TPM1-205ENST00000357980 NEIL2Q969S2 332 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 NSL1Q96IY1 281 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CAMK1GQ96NX5 476 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 HBEGFQ99075 208 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 TUBB6Q9BUF5 446 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 FARSBQ9NSD9 589 aaKnown RBP16.52■□□□□ 0.23
TPM1-205ENST00000357980 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.23
TPM1-205ENST00000357980 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 SH2B3Q9UQQ2 575 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 HEBP2Q9Y5Z4 205 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 KCNE2Q9Y6J6 123 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 CAPN7Q9Y6W3 813 aa16.52■□□□□ 0.23
TPM1-205ENST00000357980 TP53BP1Q12888 1972 aaPredicted RBP16.51■□□□□ 0.23
TPM1-205ENST00000357980 MEI4A8MW99 385 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 UBDO15205 165 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 SLC22A2O15244 555 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 JUPP14923 745 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 CALB2P22676 271 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 MAOBP27338 520 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 ADSLP30566 484 aaPredicted RBP16.51■□□□□ 0.23
TPM1-205ENST00000357980 HALP42357 657 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 ILF3Q12906 894 aaKnown RBP eCLIP16.51■□□□□ 0.23
TPM1-205ENST00000357980 TSSK4Q6SA08 328 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms