RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CMTM7Q96FZ5 175 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 EGLN2Q96KS0 407 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 EBPLQ9BY08 206 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 UGT2B28Q9BY64 529 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 SERHLQ9NQF3 203 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 PCDHGA11Q9Y5H2 935 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 NOTCH4Q99466 2003 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 A0A087WXM4 84 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 UPK3BL1B0FP48 263 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 UPK3BL2E5RIL1 263 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 BMP10O95393 424 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 CTSLP07711 333 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 TIMP2P16035 220 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 PTPN2P17706 415 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 IST1P53990 364 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 SH3BGRP55822 239 aaPredicted RBP15.41■□□□□ 0.06
PHTF1-201ENST00000357783 ABRQ12979 859 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 FRG2Q64ET8 278 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 MICU2Q8IYU8 434 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 CLEC4FQ8N1N0 589 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 FOXJ1Q92949 421 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 SLC47A1Q96FL8 570 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 ZSWIM3Q96MP5 696 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 FRG2BQ96QU4 278 aa15.41■□□□□ 0.06
PHTF1-201ENST00000357783 KAT8Q9H7Z6 458 aaKnown RBP15.41■□□□□ 0.06
PHTF1-201ENST00000357783 CHD7Q9P2D1 2997 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 SLC16A5O15375 505 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ALBP02768 609 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 PRPS2P11908 318 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 CDKN2CP42773 168 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ARSFP54793 590 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 PFN3P60673 137 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 LAPTM5Q13571 262 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ZNF77Q15935 545 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 LPCAT2Q7L5N7 544 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 NECAB2Q7Z6G3 386 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 PATL1Q86TB9 770 aaKnown RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 DRAXINQ8NBI3 349 aaPredicted RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ASZ1Q8WWH4 475 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ING5Q8WYH8 240 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 MRGPRX3Q96LB0 322 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 CPPED1Q9BRF8 314 aaPredicted RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 C11orf49Q9H6J7 331 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 RSL24D1Q9UHA3 163 aaKnown RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 PRKD3O94806 890 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 DDX6P26196 483 aaKnown RBP eCLIP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 PREPP48147 710 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 EPHA5P54756 1037 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 AP1S2P56377 157 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 ADARB1P78563 741 aaKnown RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 DAG1Q14118 895 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 DMC1Q14565 340 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 SYTL3Q4VX76 610 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 FAM120BQ96EK7 910 aaKnown RBP15.4■□□□□ 0.06
PHTF1-201ENST00000357783 KCNH6Q9H252 994 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 GPRC5BQ9NZH0 403 aa15.4■□□□□ 0.06
PHTF1-201ENST00000357783 A0A096LPI6 279 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ARHGEF33A8MVX0 844 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 KPNA5O15131 536 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 TSPAN6O43657 245 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ERN1O75460 977 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 PRSS23O95084 383 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 FTH1P02794 183 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 MYCLP1P12525 358 aaPredicted RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ALDH3A2P51648 485 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 DCDC1P59894 354 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 IRF8Q02556 426 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 CBX2Q14781 532 aaPredicted RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ZNF697Q5TEC3 545 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 TMEM132CQ8N3T6 1108 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 LILRA3Q8N6C8 439 aaPredicted RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 MRPL43Q8N983 215 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 CLP1Q92989 425 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ITCHQ96J02 903 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 RMND5AQ9H871 391 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 H0Y858 1186 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 SCELO95171 688 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 CST1P01037 141 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 AMD1P17707 334 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 MAP4P27816 1152 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 MAPK1P28482 360 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 NNMTP40261 264 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 YAP1P46937 504 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 CTSCP53634 463 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 HTRA4P83105 476 aaPredicted RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 DDX39BQ13838 428 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 LRIF1Q5T3J3 769 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 HENMT1Q5T8I9 393 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 ATG9BQ674R7 924 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 OR4F3Q6IEY1 312 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 USP51Q70EK9 711 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 RAVER1Q8IY67 606 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 TRAM1L1Q8N609 369 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 DDHD1Q8NEL9 900 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 MED8Q96G25 268 aa15.39■□□□□ 0.05
PHTF1-201ENST00000357783 LIN28AQ9H9Z2 209 aaKnown RBP15.39■□□□□ 0.05
PHTF1-201ENST00000357783 TBC1D14Q9P2M4 693 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms