RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 KATNA1O75449 491 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 SKAP2O75563 359 aaPredicted RBP17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 CSF2P04141 144 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 EPHA3P29320 983 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 CCNG1P51959 295 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 TBPL1P62380 186 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 C1orf61Q13536 156 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 KRT72Q14CN4 511 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 CHCHD4Q8N4Q1 142 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 FBXL6Q8N531 539 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 ATP6V1E2Q96A05 226 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 OR52B2Q96RD2 323 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 TUBB6Q9BUF5 446 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 SGPP1Q9BX95 441 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 NUSAP1Q9BXS6 441 aaKnown RBP17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 GSDMCQ9BYG8 508 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 TUBB1Q9H4B7 451 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 WDR55Q9H6Y2 383 aaPredicted RBP17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 MVB12BQ9H7P6 319 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 ACTR5Q9H9F9 607 aaPredicted RBP17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 TAAR2Q9P1P5 351 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 APOBEC3BQ9UH17 382 aaKnown RBP17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 TRIM33Q9UPN9 1127 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 SDHDO14521 159 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 ATP5HO75947 161 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 F3P13726 295 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 NME1P15531 152 aaKnown RBP17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 HALP42357 657 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 SCTRP47872 440 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 DHPSP49366 369 aaPredicted RBP17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 BLKP51451 505 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 CDC16Q13042 620 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 TBCCQ15814 346 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 CYP2A13Q16696 494 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 LSM12Q3MHD2 195 aaKnown RBP17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 PRRT3Q5FWE3 981 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 MILR1Q7Z6M3 343 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 CDYL2Q8N8U2 506 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 ACTRT2Q8TDY3 377 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 NELL1Q92832 810 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 PRR11Q96HE9 360 aaPredicted RBP17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 PTGDR2Q9Y5Y4 395 aa17.58■□□□□ 0.41
SMARCD3-202ENST00000356800 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 CAPN14A8MX76 684 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 UNC5CO95185 931 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 UROSP10746 265 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 CTSEP14091 401 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 ARL1P40616 181 aaPredicted RBP17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 AFF3P51826 1226 aaKnown RBP17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 PLK5Q496M5 336 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 TCHHL1Q5QJ38 904 aaPredicted RBP17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 LYSMD4Q5XG99 296 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 SUSD1Q6UWL2 747 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 EFL1Q7Z2Z2 1120 aaKnown RBP17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 BMP8AQ7Z5Y6 402 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 SFTPA2Q8IWL1 248 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 HOMEZQ8IX15 550 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 C2orf73Q8N5S3 287 aaPredicted RBP17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 TWIST2Q8WVJ9 160 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 CCDC106Q9BWC9 280 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 TXLNGQ9NUQ3 528 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 SPATA7Q9P0W8 599 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 ARMCX1Q9P291 453 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 HEBP2Q9Y5Z4 205 aa17.58■□□□□ 0.4
SMARCD3-202ENST00000356800 PI4KAP42356 2102 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 KMT2EQ8IZD2 1858 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 GOLGA8QA0A0J9YX86 632 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 GOLGA8OA6NCC3 632 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 GOLGA8NF8WBI6 632 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 CAPN1P07384 714 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 EBLN1P0CF75 366 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 T-ENOLP0DO92 83 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 SLC19A1P41440 591 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 ARHGAP19Q14CB8 494 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 PRAMEF14Q5SWL7 426 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 CAPN13Q6MZZ7 669 aaPredicted RBP17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 IYDQ6PHW0 289 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 TAF8Q7Z7C8 310 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 C11orf74Q86VG3 221 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 LINC01555Q8NAE3 123 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 CEP70Q8NHQ1 597 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 PATE1Q8WXA2 126 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 C19orf60Q96EN9 201 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 C3orf30Q96M34 536 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 CCT7Q99832 543 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 TMEM74BQ9NUR3 256 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 TRPS1Q9UHF7 1281 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 POLG2Q9UHN1 485 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 SH2B3Q9UQQ2 575 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 BTRCQ9Y297 605 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 LAMA1P25391 3075 aa17.57■□□□□ 0.4
SMARCD3-202ENST00000356800 CACNA1EQ15878 2313 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 E9PBE3 544 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 PIP5K1BO14986 540 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 KLHL41O60662 606 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 CRCPO75575 148 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 ENO1P06733 434 aaKnown RBP17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 HGFP14210 728 aa17.56■□□□□ 0.4
SMARCD3-202ENST00000356800 NPPBP16860 134 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms