RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SGPP1Q9BX95 441 aa15.13■□□□□ 0.01
CTSA-202ENST00000354880 APOBEC3BQ9UH17 382 aaKnown RBP15.13■□□□□ 0.01
CTSA-202ENST00000354880 TRPS1Q9UHF7 1281 aa15.13■□□□□ 0.01
CTSA-202ENST00000354880 ZFP69BQ9UJL9 534 aa15.13■□□□□ 0.01
CTSA-202ENST00000354880 RNF11Q9Y3C5 154 aa15.13■□□□□ 0.01
CTSA-202ENST00000354880 COLEC10Q9Y6Z7 277 aa15.13■□□□□ 0.01
CTSA-202ENST00000354880 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 PIP5K1BO14986 540 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 BCAT2O15382 392 aaPredicted RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 CSF2P04141 144 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 SERPINA6P08185 405 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 CCND1P24385 295 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 HMOX2P30519 316 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 AFF3P51826 1226 aaKnown RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 FASTKQ14296 549 aaKnown RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 LSM12Q3MHD2 195 aaKnown RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 PRRT3Q5FWE3 981 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 MYLK4Q86YV6 388 aaPredicted RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 HOMEZQ8IX15 550 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 DDIASQ8IXT1 998 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 GBP7Q8N8V2 638 aaPredicted RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 CEP70Q8NHQ1 597 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 GAB3Q8WWW8 586 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 CCDC28BQ9BUN5 200 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 NMUR2Q9GZQ4 415 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 MYLK2Q9H1R3 596 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 TUBB1Q9H4B7 451 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
CTSA-202ENST00000354880 TAAR2Q9P1P5 351 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 KCNE2Q9Y6J6 123 aa15.12■□□□□ 0.01
CTSA-202ENST00000354880 E9PBE3 544 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 FCHO1O14526 889 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 KLHL41O60662 606 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 CCDC22O60826 627 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 NME1P15531 152 aaKnown RBP15.11■□□□□ 0.01
CTSA-202ENST00000354880 NDUFS1P28331 727 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 CSNK1EP49674 416 aaKnown RBP15.11■□□□□ 0.01
CTSA-202ENST00000354880 CHIT1Q13231 466 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 CYP2A13Q16696 494 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 GGTA1PQ4G0N0 100 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 METTL21CQ5VZV1 264 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 NXNQ6DKJ4 435 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 SUSD1Q6UWL2 747 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 TAF8Q7Z7C8 310 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 CLNKQ7Z7G1 428 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 LMNTD1Q8N9Z9 388 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 L3MBTL4Q8NA19 623 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 DTWD2Q8NBA8 298 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 MIPEPQ99797 713 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 PFDN4Q9NQP4 134 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 GPRC5BQ9NZH0 403 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 BTRCQ9Y297 605 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 PCM1Q15154 2024 aa15.11■□□□□ 0.01
CTSA-202ENST00000354880 E7EQ34 232 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 VILLO15195 856 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 KDM1AO60341 852 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 UGDHO60701 494 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 CELA2BP08218 269 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 NPPBP16860 134 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 GNAZP19086 355 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 RAB28P51157 221 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 NXPH1P58417 271 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 IRF8Q02556 426 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 SRSF5Q13243 272 aaKnown RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 C1orf61Q13536 156 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 SPDYAQ5MJ70 313 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 TCHHL1Q5QJ38 904 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 LYSMD4Q5XG99 296 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 CCDC121Q6ZUS5 278 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 OR52E1Q8NGJ3 308 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 ACTRT2Q8TDY3 377 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 SETD7Q8WTS6 366 aaKnown RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 CXorf40BQ96DE9 158 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 MAGEB10Q96LZ2 347 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 C3orf30Q96M34 536 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 CCT7Q99832 543 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 LRRC61Q9BV99 259 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 KIR3DX1Q9H7L2 352 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 ZNF624Q9P2J8 865 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 FBXO4Q9UKT5 387 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 TRIM33Q9UPN9 1127 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PTGDR2Q9Y5Y4 395 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PRAMEF33A0A0G2JMD5 474 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 ATP6AP2A0A1C7CYW4 349 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 CLGNO14967 610 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PRAMEF4O60810 478 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 ATP6AP2O75787 350 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 WFS1O76024 890 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 LINC00032P0C843 101 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 NCF2P19878 526 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 SLC19A1P41440 591 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 DHPSP49366 369 aaPredicted RBP15.1■□□□□ 0.01
CTSA-202ENST00000354880 C21orf59P57076 290 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 PCDH1Q08174 1060 aa15.1■□□□□ 0.01
CTSA-202ENST00000354880 CPSF6Q16630 551 aaKnown RBP eCLIP15.1■□□□□ 0.01
CTSA-202ENST00000354880 XKR6Q5GH73 641 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms