RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ADIPOR2Q86V24 386 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 CSGALNACT1Q8TDX6 532 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 ELMO1Q92556 727 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FBXL8Q96CD0 374 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 FAM120BQ96EK7 910 aaKnown RBP21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 SERHLQ9NQF3 203 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 SPHK2Q9NRA0 654 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 TDP1Q9NUW8 608 aa21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 DDX18Q9NVP1 670 aaKnown RBP21.67■■□□□ 1.06
NKX2-1-201ENST00000354822 SOBPA7XYQ1 873 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 CREG1O75629 220 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 PCNAP12004 261 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 TYRP14679 529 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 JUPP14923 745 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 NNMTP40261 264 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 NEK2P51955 445 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 EPHA5P54756 1037 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 PHC1P78364 1004 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 HTRA4P83105 476 aaPredicted RBP21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 ENPP6Q6UWR7 440 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 GPR180Q86V85 440 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 OFCC1Q8IZS5 231 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 TRAM1L1Q8N609 369 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 KLHL23Q8NBE8 558 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 CPPED1Q9BRF8 314 aaPredicted RBP21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 TBCDQ9BTW9 1192 aa21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 NFKBIL1Q9UBC1 381 aaPredicted RBP21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 MBD1Q9UIS9 605 aaPredicted RBP21.66■■□□□ 1.06
NKX2-1-201ENST00000354822 ZBBXA8MT70 800 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 WNT9AO14904 365 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 RECQL5O94762 991 aaPredicted RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 SLCO2B1O94956 709 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 POLR2EP19388 210 aaKnown RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 RPL10P27635 214 aaKnown RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 ABHD18Q0P651 414 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 DPY19L1Q2PZI1 675 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 TTC23Q5W5X9 447 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 DNAJC14Q6Y2X3 702 aaPredicted RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 RTL10Q7L3V2 364 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 RASGRP3Q8IV61 690 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 ADHFE1Q8IWW8 467 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 ZSCAN5AQ9BUG6 496 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 PCDH10Q9P2E7 1040 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 ERVW-1Q9UQF0 538 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 HELZP42694 1942 aaKnown RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 GNGT2O14610 69 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 AMD1P17707 334 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 SDC1P18827 310 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 PCSK6P29122 969 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 LRRC73Q5JTD7 316 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 KIAA0907Q7Z7F0 614 aaPredicted RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 DDHD1Q8NEL9 900 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 PYCR2Q96C36 320 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 REXO5Q96IC2 774 aaKnown RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 HHIPQ96QV1 700 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 NPLQ9BXD5 320 aaPredicted RBP21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 HCFC1R1Q9NWW0 138 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 IRAK3Q9Y616 596 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 CROCCQ5TZA2 2017 aa21.65■■□□□ 1.06
NKX2-1-201ENST00000354822 PER2O15055 1255 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 PRMT3O60678 531 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 PRKD3O94806 890 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 PTPN2P17706 415 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 PRPS1L1P21108 318 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 MAP4P27816 1152 aaKnown RBP21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 HALP42357 657 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 HLCSP50747 726 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 GZMMP51124 257 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 CHIT1Q13231 466 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 PON2Q15165 354 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 SERPINA13PQ6UXR4 307 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 HSD11B1LQ7Z5J1 315 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 TERB1Q8NA31 727 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 ATL1Q8WXF7 558 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 NCLNQ969V3 563 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 TSSK3Q96PN8 268 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 RBM4BQ9BQ04 359 aaKnown RBP21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 FAM83CQ9BQN1 747 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 RBM4Q9BWF3 364 aaKnown RBP21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 CARS2Q9HA77 564 aaKnown RBP21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 USE1Q9NZ43 259 aa21.64■■□□□ 1.06
NKX2-1-201ENST00000354822 TSPAN11A1L157 253 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 H0Y858 1186 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 TRPC1P48995 793 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 PFN3P60673 137 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 CSTF3Q12996 717 aaKnown RBP21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 TEAD2Q15562 447 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 PGS1Q32NB8 556 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 GTDC1Q4AE62 458 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 PHACTR4Q8IZ21 702 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 FAM86B1Q8N7N1 296 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 HCAR2Q8TDS4 363 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 CLP1Q92989 425 aaKnown RBP21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 SCAMP4Q969E2 229 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 APIPQ96GX9 242 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 METTL2AQ96IZ6 378 aaKnown RBP21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 FCRL1Q96LA6 429 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 MUS81Q96NY9 551 aa21.64■■□□□ 1.05
NKX2-1-201ENST00000354822 UPK3BL1B0FP48 263 aa21.63■■□□□ 1.05
NKX2-1-201ENST00000354822 UPK3BL2E5RIL1 263 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms