RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TFAP2CQ92754 450 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 LRIG1Q96JA1 1093 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 FUNDC2Q9BWH2 189 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 NSMCE4AQ9NXX6 385 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CNOT6Q9ULM6 557 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 KCTD3Q9Y597 815 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PSAT1Q9Y617 370 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TICRRQ7Z2Z1 1910 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 A0A0J9YYE9 177 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 EI24O14681 340 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TRBC1P01850 177 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 JUNP05412 331 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CHRNGP07510 517 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 BMP1P13497 986 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 HNRNPLP14866 589 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 KCNA5P22460 613 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 DBPQ10586 325 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ERAP2Q6P179 960 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 GLB1L3Q8NCI6 653 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TRPC4APQ8TEL6 797 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SNAPC3Q92966 411 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 MCCC1Q96RQ3 725 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 AGAP2Q99490 1192 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PHF7Q9BWX1 381 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CLPBQ9H078 707 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 MFSD1Q9H3U5 465 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 BRD9Q9H8M2 597 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SSU72Q9NP77 194 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 OAZ3Q9UMX2 235 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SCO2O43819 266 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 DEAF1O75398 565 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 KAT7O95251 611 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 UGT2B4P06133 528 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 RAD51Q06609 339 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 MERTKQ12866 999 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 SMAD2Q15796 467 aaKnown RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 AAK1Q2M2I8 961 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 HNRNPA1L2Q32P51 320 aaKnown RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 CYP27C1Q4G0S4 372 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 GRTP1Q5TC63 336 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 NXNL2Q5VZ03 156 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 GDPD4Q6W3E5 623 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 TNIP2Q8NFZ5 429 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 GPR150Q8NGU9 434 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ISL2Q96A47 359 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 SMIM14Q96QK8 99 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 RMND5AQ9H871 391 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 CPNE7Q9UBL6 633 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF106Q9H2Y7 1883 aaKnown RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 KRT87PA6NCN2 255 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 LINC01387J3KSC0 135 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 SNNO75324 88 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 RPP40O75818 363 aaKnown RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 INMTO95050 263 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 CTSLP07711 333 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ALOX5P09917 674 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 PIRTP0C851 137 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 GP5P40197 560 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 TNFRSF4P43489 277 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ARSDP51689 593 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ST8SIA6P61647 398 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF234Q14588 700 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 LEXMQ3ZCV2 418 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 C9orf64Q5T6V5 341 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 GLT6D1Q7Z4J2 308 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 C2CD4AQ8NCU7 369 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 EID2BQ96D98 161 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ANKRD60Q9BZ19 345 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 C6orf62Q9GZU0 229 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-203ENST00000354674 ZDHHC6Q9H6R6 413 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 TCF7L2Q9NQB0 619 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 SCN8AQ9UQD0 1980 aa9.86□□□□□ -0.83
SYNE1-203ENST00000354674 EDDM13A0A1B0GTR0 161 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CCDC78A2IDD5 438 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 FAM172BPA6NC97 362 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 C2orf81A6NN90 581 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 H7C0S8 307 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 GSTM1P09488 218 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 FGF3P11487 239 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MPSTP25325 297 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 HMGCLP35914 325 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CSRP3P50461 194 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TPD52P55327 224 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 DAB2P98082 770 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SUZ12Q15022 739 aaKnown RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CCBE1Q6UXH8 406 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 ERMP1Q7Z2K6 904 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 RYBPQ8N488 228 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SLC44A3Q8N4M1 653 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SCRN2Q96FV2 425 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 FYTTD1Q96QD9 318 aaKnown RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 RBBP8Q99708 897 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 RTKNQ9BST9 563 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 KCNK12Q9HB15 430 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 FBRSL1Q9HCM7 1045 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms