RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NEK5Q6P3R8 708 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 HS6ST3Q8IZP7 471 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 ARL10Q8N8L6 244 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 OR7A2PQ8NGA2 310 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 HIST1H2AHQ96KK5 128 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 HIST1H2AJQ99878 128 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 H2AFJQ9BTM1 129 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 FBXO10Q9UK96 956 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 SH3BP1Q9Y3L3 701 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 C16orf96A6NNT2 1141 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 LHCGRP22888 699 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 FMO3P31513 532 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF551Q7Z340 670 aaPredicted RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 GPR149Q86SP6 731 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 ZDHHC21Q8IVQ6 265 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 DPH2Q9BQC3 489 aaPredicted RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 TSEN34Q9BSV6 310 aaKnown RBP19.05■□□□□ 0.64
COL13A1-201ENST00000354547 BAG5Q9UL15 447 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 ORC6Q9Y5N6 252 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 SNX5Q9Y5X3 404 aa19.05■□□□□ 0.64
COL13A1-201ENST00000354547 SEC14L2O76054 403 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PTSQ03393 145 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 SKIV2LQ15477 1246 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF621Q6ZSS3 439 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PIWIL3Q7Z3Z3 882 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 EGFL6Q8IUX8 553 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 OR2AP1Q8NGE2 309 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PLEKHA8Q96JA3 519 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 MTERF1Q99551 399 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 CPPED1Q9BRF8 314 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 C3orf18Q9UK00 162 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 ABCG2Q9UNQ0 655 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 DOLKQ9UPQ8 538 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 CORINQ9Y5Q5 1042 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 ANAPC1Q9H1A4 1944 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 ALDH4A1P30038 563 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 MLLT10P55197 1068 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 RAPSNQ13702 412 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PLEKHG6Q3KR16 790 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 GPR33Q49SQ1 333 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 RBM48Q5RL73 367 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 LAIR2Q6ISS4 152 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 VTCN1Q7Z7D3 282 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 DCP2Q8IU60 420 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 SLC15A4Q8N697 577 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 OR5K1Q8NHB7 308 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 HDAC2Q92769 488 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 FOXJ1Q92949 421 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PYURFQ96I23 114 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 P2RY13Q9BPV8 354 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 FUNDC2Q9BWH2 189 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 PAK1IP1Q9NWT1 392 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 ZDHHC3Q9NYG2 299 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 STOML2Q9UJZ1 356 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 LSM7Q9UK45 103 aaKnown RBP19.04■□□□□ 0.64
COL13A1-201ENST00000354547 INSL5Q9Y5Q6 135 aa19.04■□□□□ 0.64
COL13A1-201ENST00000354547 NRG2O14511 850 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TOR1BO14657 336 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 AXIN1O15169 862 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 CLDN8P56748 225 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 FOXD4Q12950 439 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 CARD16Q5EG05 197 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SVOPLQ8N434 492 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SCAMP4Q969E2 229 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 RMND5AQ9H871 391 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SLCO3A1Q9UIG8 710 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 PRAMEF4O60810 478 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 ERN1O75460 977 aaKnown RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 ALDH1A1P00352 501 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 HPRP00739 348 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SPCS2Q15005 226 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 DPY19L1Q2PZI1 675 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 PRAMEF9Q5VWM5 478 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 CRTC3Q6UUV7 619 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 CCDC81Q6ZN84 652 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 CEP68Q76N32 757 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 ZCCHC7Q8N3Z6 543 aaKnown RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 PANX1Q96RD7 426 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TUBA1CQ9BQE3 449 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 KCNH6Q9H252 994 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SNX6Q9UNH7 406 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 DOCK6Q96HP0 2047 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TRBV5-3A0A0A0MS03 114 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SLC1A7O00341 560 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 BCKDKO14874 412 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 FKBP9O95302 570 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 SOD2P04179 222 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 GSSP48637 474 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 ZNF829Q3KNS6 432 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 POM121L1PQ3SYA9 428 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 LYPLAL1Q5VWZ2 237 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 ATG9BQ674R7 924 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 FKBP9P1Q75LS8 142 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TERB1Q8NA31 727 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 BORCS5Q969J3 196 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TRMT2BQ96GJ1 504 aaKnown RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 NODALQ96S42 347 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 PCDH12Q9NPG4 1184 aa19.03■□□□□ 0.64
COL13A1-201ENST00000354547 MRPL17Q9NRX2 175 aaKnown RBP19.03■□□□□ 0.64
COL13A1-201ENST00000354547 TMEFF2Q9UIK5 374 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms