RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 BEST3Q8N1M1 668 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 WDR6Q9NNW5 1121 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 A0A1W2PP18 115 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GRXCR2A6NFK2 248 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 RHOCP08134 193 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 HNRNPLP14866 589 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ACTA2P62736 377 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ACTG2P63267 376 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 AVPI1Q5T686 147 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ARMC12Q5T9G4 340 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 MMP12P39900 470 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 RGS8P57771 180 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PRKCDQ05655 676 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 MOGSQ13724 837 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 OR8J3Q8NGG0 315 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ELL3Q9HB65 397 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 C17orf113A0A1B0GUU1 675 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ARSFP54793 590 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 C1orf94Q6P1W5 598 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 C2orf49Q9BVC5 232 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 FLRT1Q9NZU1 646 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ICAM1P05362 532 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 RAP2BP61225 183 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 HHIPL2Q6UWX4 724 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ZNHIT2Q9UHR6 403 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ERVW-1Q9UQF0 538 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 SLC37A4O43826 429 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 STK16O75716 305 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 HSD3B1P14060 373 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 MANFP55145 182 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 VSX2P58304 361 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GRIK2Q13002 908 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PEA15Q15121 130 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 MYLK3Q32MK0 819 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ICKQ9UPZ9 632 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 RBM7Q9Y580 266 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GIMD1P0DJR0 217 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 LPOP22079 712 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PTPN6P29350 595 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GNALP38405 381 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 TARS2Q9BW92 718 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 SLC34A2O95436 690 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 RANP62826 216 aaKnown RBP12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GAS6Q14393 721 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 ARL6IP1Q15041 203 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 Q3C1V9 767 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 UBA3Q8TBC4 463 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 TMEM59LQ9UK28 342 aa12.36□□□□□ -0.43
COL6A3-203ENST00000353578 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 BMP2P12643 396 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SERPINF1P36955 418 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 CLCN4P51793 760 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ZBTB46Q86UZ6 589 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 OR10H5Q8NGA6 315 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SLC22A17Q8WUG5 538 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 OR51B5Q9H339 312 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 TLR4O00206 839 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 RPL35P42766 123 aaKnown RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 GALK2Q01415 458 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 OGDHQ02218 1023 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ZC3HC1Q86WB0 502 aaKnown RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 MAP4K3Q8IVH8 894 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 PPIL3Q9H2H8 161 aaKnown RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SNCAIPQ9Y6H5 919 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ICE1Q9Y2F5 2266 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 MPSTP25325 297 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SCNN1GP51170 649 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 XKR6Q5GH73 641 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 NAT16Q8N8M0 369 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 FBXO32Q969P5 355 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ACSF2Q96CM8 615 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 KXD1Q9BQD3 176 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ICMTO60725 284 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SEC23AQ15436 765 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 TLDC1Q6P9B6 456 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 CORO6Q6QEF8 472 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ZNF354BQ96LW1 612 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 OR2M2Q96R28 347 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 KCNK13Q9HB14 408 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms