RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PRSS23O95084 383 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 KCNH1O95259 989 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 NFATC1O95644 943 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CDH1P12830 882 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 JUNBP17275 347 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 OGNP20774 298 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CRHBPP24387 322 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SERPINA4P29622 427 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ERVK-8P63133 956 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 RELAQ04206 551 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 DMC1Q14565 340 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 AAK1Q2M2I8 961 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PLA2G4EQ3MJ16 856 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PDCD4Q53EL6 469 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 C6orf136Q5SQH8 315 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 C9orf64Q5T6V5 341 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 LRRC66Q68CR7 880 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 TXNDC11Q6PKC3 985 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 FAM151BQ6UXP7 276 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 DLEU7Q6UYE1 221 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SFRP1Q8N474 314 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 FNDC5Q8NAU1 212 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PEX13Q92968 403 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SCRN2Q96FV2 425 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PPM1MQ96MI6 270 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CDK15Q96Q40 435 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 HGH1Q9BTY7 390 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 BOCQ9BWV1 1114 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GPR63Q9BZJ6 419 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ING2Q9H160 280 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 BRD9Q9H8M2 597 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ZFYVE1Q9HBF4 777 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SYTL2Q9HCH5 934 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 OBP2AQ9NY56 170 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 TAS2R13Q9NYV9 303 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 DEC1Q9P2X7 70 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SUN2Q9UH99 717 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PPIL1Q9Y3C6 166 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CKAP5Q14008 2032 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CXorf51AA0A1B0GTR3 108 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 DYTNA2CJ06 578 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 FAM234BA2RU67 622 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 IQCF5A8MTL0 148 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 STX7O15400 261 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SPINT1O43278 529 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 TIMP2P16035 220 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 IL7RP16871 459 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 IST1P53990 364 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 RAB15P59190 212 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 DAG1Q14118 895 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF234Q14588 700 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 BROXQ5VW32 411 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GTF2IRD2BQ6EKJ0 949 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CES5AQ6NT32 575 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GALNT18Q6P9A2 607 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 Q6ZSR9 355 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 R3HCC1LQ7Z5L2 792 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GTF2IRD2Q86UP8 949 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ZFAND4Q86XD8 727 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CLEC4FQ8N1N0 589 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 STK40Q8N2I9 435 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 OR52B6Q8NGF0 335 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 CHPT1Q8WUD6 406 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 MCCC1Q96RQ3 725 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 HBEGFQ99075 208 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 GPR21Q99679 349 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 C1QTNF3Q9BXJ4 246 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 NUSAP1Q9BXS6 441 aaKnown RBP8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ADNPQ9H2P0 1102 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 TMEM245Q9H330 911 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ARMC7Q9H6L4 198 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SELENONQ9NZV5 590 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ZIM2Q9NZV7 527 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 B4GALT6Q9UBX8 382 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 TMPRSS11EQ9UL52 423 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 ITM2BQ9Y287 266 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PCDHB3Q9Y5E6 796 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 PCDHGA8Q9Y5G5 932 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 SLC30A1Q9Y6M5 507 aa8.39□□□□□ -1.07
TRIM55-204ENST00000353317 H7C0S8 307 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 BTN3A1O00481 513 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 KLK8O60259 260 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 ABCB7O75027 752 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 SULT1C4O75897 302 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 OR4F21O95013 312 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 BCL10O95999 233 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CHEK2O96017 543 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 C1SP09871 688 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 THRBP10828 461 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 IL12RB1P42701 662 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 HK3P52790 923 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PLA2G16P53816 162 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PHEXP78562 749 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 RAD51Q06609 339 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PRKG2Q13237 762 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 NR1D2Q14995 579 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms