RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 HNF4AP41235 474 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 GPR1P46091 355 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 OR4D2P58180 307 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF658BQ4V348 819 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 ZBTB49Q6ZSB9 765 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 ERN2Q76MJ5 926 aaKnown RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 RALGPS2Q86X27 583 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 TBC1D21Q8IYX1 336 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 CPA6Q8N4T0 437 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 KRTCAP2Q8N6L1 136 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 TNIP2Q8NFZ5 429 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 OR56A3Q8NH54 315 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 SUSD6Q92537 303 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 BIRC7Q96CA5 298 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF514Q96K75 400 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 NSMCE2Q96MF7 247 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 OR52E6Q96RD3 313 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 CDCA3Q99618 268 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 OSBPL6Q9BZF3 934 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 C8orf4Q9NR00 106 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 AGPAT4Q9NRZ5 378 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 DLGAP4Q9Y2H0 992 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 TBC1D3BA6NDS4 549 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 C1QTNF3-AMACRE9PGA6 284 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 H3BM21 787 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 CLGNO14967 610 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 DFNA5O60443 496 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 ERN1O75460 977 aaKnown RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 GMNNO75496 209 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 AMD1P17707 334 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 HRH2P25021 359 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 S100A3P33764 101 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 MTPNP58546 118 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 NAE1Q13564 534 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 GTF2H3Q13889 308 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 SELPLGQ14242 412 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 XKR6Q5GH73 641 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 INTS11Q5TA45 600 aaKnown RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 RAET1GQ6H3X3 334 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 GRHL2Q6ISB3 625 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 GET4Q7L5D6 327 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 TESCQ96BS2 214 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 CENPNQ96H22 339 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 FCRL1Q96LA6 429 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 PKP4Q99569 1192 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 CIB1Q99828 191 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 FAM192AQ9GZU8 254 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 RMND5AQ9H871 391 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 TRIM39Q9HCM9 518 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 VAPAQ9P0L0 249 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-201ENST00000350028 NEUROG3Q9Y4Z2 214 aa16.22■□□□□ 0.19
SAMM50-201ENST00000350028 LRRK1Q38SD2 2015 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 PRRC2BQ5JSZ5 2229 aaKnown RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 C17orf113A0A1B0GUU1 675 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 C7orf72A4D263 438 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 NPC1O15118 1278 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 MMP20O60882 483 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 LILRB5O75023 590 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 HSD3B1P14060 373 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 FCARP24071 287 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 HSD3B2P26439 372 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 PBLDP30039 288 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 OXTRP30559 389 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 BDKRB1P46663 353 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 PLOD1Q02809 727 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 CYP4F3Q08477 520 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 NRF1Q16656 503 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 ATG2AQ2TAZ0 1938 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 SLC44A4Q53GD3 710 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 MSANTD1Q6ZTZ1 278 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 KIAA1549LQ6ZVL6 1849 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 GPR149Q86SP6 731 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 LILRA3Q8N6C8 439 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 APIPQ96GX9 242 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 METTL2AQ96IZ6 378 aaKnown RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 LINC00615Q96LM1 132 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 ZNF583Q96ND8 569 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 CCDC115Q96NT0 180 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 GBP5Q96PP8 586 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 SLC29A1Q99808 456 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 C9orf16Q9BUW7 83 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 RPF2Q9H7B2 306 aaKnown RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 CERS4Q9HA82 394 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 UBAP1Q9NZ09 502 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 TCF20Q9UGU0 1960 aaKnown RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 KIF26AQ9ULI4 1882 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-201ENST00000350028 USP22Q9UPT9 525 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 MAN2B2Q9Y2E5 1009 aa16.21■□□□□ 0.19
SAMM50-201ENST00000350028 DENND4AQ7Z401 1863 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 A0A096LPI6 279 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 KRT87PA6NCN2 255 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 H0YIV9 168 aa16.2■□□□□ 0.18
SAMM50-201ENST00000350028 VEGFDO43915 354 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms