RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 APOLD1Q96LR9 279 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 MAGEB18Q96M61 343 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 OR4K3Q96R72 315 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 SGPP1Q9BX95 441 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 MANSC1Q9H8J5 431 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 SPHK1Q9NYA1 384 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 SH2B3Q9UQQ2 575 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 SLC22A14Q9Y267 594 aa18.4■□□□□ 0.54
CHMP4A-201ENST00000347519 A0A1B0GTL3 188 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 BTN3A3O00478 584 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 SNRNP200O75643 2136 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 WDR47O94967 919 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 SERPINE1P05121 402 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 ZNF883P0CG24 379 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 TBPL1P62380 186 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 YBX1P67809 324 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 TSTA3Q13630 321 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 ARHGAP19Q14CB8 494 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 PLCL1Q15111 1095 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 CSRP2Q16527 193 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 ZCCHC8Q6NZY4 707 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 GOLGA7Q7Z5G4 137 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 THOC6Q86W42 341 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 AMIGO1Q86WK6 493 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 ADGRF3Q8IZF5 1079 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 TEX9Q8N6V9 391 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 PPP1R14CQ8TAE6 165 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 TWSG1Q9GZX9 223 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 LNPEPQ9UIQ6 1025 aa18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 GOLGA4Q13439 2230 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-201ENST00000347519 K7EPI3 171 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 UBFD1O14562 309 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 CASC3O15234 703 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 PRICKLE3O43900 615 aaPredicted RBP18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 CHRNGP07510 517 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 PSMB5P28074 263 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 STX3Q13277 289 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 DBX2Q6ZNG2 339 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 FRMD7Q6ZUT3 714 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 LRRC70Q7Z2Q7 622 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 HMGCLL1Q8TB92 370 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 EDEM2Q9BV94 578 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 DUSP23Q9BVJ7 150 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 SHCBP1LQ9BZQ2 653 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 SLC32A1Q9H598 525 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 TNFRSF12AQ9NP84 129 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 SLCO1B3Q9NPD5 702 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 SEMA4BQ9NPR2 832 aaPredicted RBP18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 OPTCQ9UBM4 332 aa18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 TNPO3Q9Y5L0 923 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-201ENST00000347519 OR7A17O14581 309 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 NPHS1O60500 1241 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 PRAMEF4O60810 478 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SNNO75324 88 aaPredicted RBP18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 ALPPL2P10696 532 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 PRDX3P30048 256 aaKnown RBP18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SHMT2P34897 504 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 HSD17B2P37059 387 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 ABCE1P61221 599 aaKnown RBP18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 CLCQ05315 142 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 GTF2H2Q13888 395 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 RCN2Q14257 317 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 CFAP157Q5JU67 520 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 PRAMEF9Q5VWM5 478 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 GTF2H2CQ6P1K8 395 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 FAM20CQ8IXL6 584 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 RBM12BQ8IXT5 1001 aaKnown RBP18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SNX31Q8N9S9 440 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 FAM181AQ8N9Y4 354 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 LRRC8CQ8TDW0 803 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 TRPC4APQ8TEL6 797 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SMPDL3AQ92484 453 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SORT1Q99523 831 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 DRC3Q9H069 523 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 SRMSQ9H3Y6 488 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 CCDC134Q9H6E4 229 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 UCK1Q9HA47 277 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 DNAJC11Q9NVH1 559 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 LRIT1Q9P2V4 623 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 PADI4Q9UM07 663 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 PCDHGB2Q9Y5G2 931 aa18.37■□□□□ 0.53
CHMP4A-201ENST00000347519 OR6C74A6NCV1 312 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 TCP11X1B4DZS4 312 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 KLF11O14901 512 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 CHRM5P08912 532 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 CD59P13987 128 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 NPPBP16860 134 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 TYRP1P17643 537 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 POLR2CP19387 275 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 SLC1A6P48664 564 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 ASPHQ12797 758 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 NR0B2Q15466 257 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 PROX2Q3B8N5 592 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 ARL13AQ5H913 290 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 CAPN13Q6MZZ7 669 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 GUSBP11Q6P575 273 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 PRR23CQ6ZRP0 262 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 RGS9BPQ6ZS82 235 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 ZNF438Q7Z4V0 828 aa18.36■□□□□ 0.53
CHMP4A-201ENST00000347519 MTERF4Q7Z6M4 381 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms