RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 H3BNC9 293 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 TIMP1P01033 207 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 GSTM1P09488 218 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 BCKDHAP12694 445 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 GPX3P22352 226 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 DNAJB13P59910 316 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 RPS13P62277 151 aaKnown RBP12.97□□□□□ -0.33
CASC4-202ENST00000345795 RHDQ02161 417 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 PTSQ03393 145 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 C2orf80Q0P641 193 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 HIST2H2ACQ16777 129 aaPredicted RBP12.97□□□□□ -0.33
CASC4-202ENST00000345795 HIST2H2AA3Q6FI13 130 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 Q6ZSR9 355 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 ZNF683Q8IZ20 524 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 FAM86B1Q8N7N1 296 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 TRMT61BQ9BVS5 477 aaKnown RBP12.97□□□□□ -0.33
CASC4-202ENST00000345795 MAGEE1Q9HCI5 957 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 GPRC5BQ9NZH0 403 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
CASC4-202ENST00000345795 CNOT1A5YKK6 2376 aaKnown RBP12.97□□□□□ -0.33
CASC4-202ENST00000345795 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 MAGEB17A8MXT2 336 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 H7BY64 318 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 E2F3O00716 465 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 ANXA6P08133 673 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 IL12AP29459 219 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 PBX2P40425 430 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
CASC4-202ENST00000345795 OGFOD2Q6N063 350 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 VITQ6UXI7 678 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
CASC4-202ENST00000345795 OR8D1Q8WZ84 308 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 REXO5Q96IC2 774 aaKnown RBP12.96□□□□□ -0.33
CASC4-202ENST00000345795 PRAP1Q96NZ9 151 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.33
CASC4-202ENST00000345795 TARM1B6A8C7 271 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 MANBAO00462 879 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 CD160O95971 181 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 MAPK8P45983 427 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.33
CASC4-202ENST00000345795 SPINT3P49223 89 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 DAB2P98082 770 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 CCDC157Q569K6 752 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 OLIG3Q7RTU3 272 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 HDDC3Q8N4P3 179 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 SCRN2Q96FV2 425 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 ADI1Q9BV57 179 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 IL21Q9HBE4 155 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 SARDHQ9UL12 918 aa12.96□□□□□ -0.33
CASC4-202ENST00000345795 ELOVL7A1L3X0 281 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 IGLON5A6NGN9 336 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 ABLIM3O94929 683 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 ADH1CP00326 375 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 RANBP1P43487 201 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 GPR153Q6NV75 609 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 BEND5Q7L4P6 421 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 OR4A15Q8NGL6 344 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 OR2A12Q8NGT7 310 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 RAB8BQ92930 207 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.34
CASC4-202ENST00000345795 PHOX2BQ99453 314 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 RPF2Q9H7B2 306 aaKnown RBP12.96□□□□□ -0.34
CASC4-202ENST00000345795 TRIM39Q9HCM9 518 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 DPP7Q9UHL4 492 aa12.96□□□□□ -0.34
CASC4-202ENST00000345795 OR52A4PA6NMU1 304 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 M0R129 80 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 PSMB5P28074 263 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 ALDH6A1Q02252 535 aaKnown RBP12.95□□□□□ -0.34
CASC4-202ENST00000345795 ARMC3Q5W041 872 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 FRG2Q64ET8 278 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 C16orf87Q6PH81 154 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 THOC6Q86W42 341 aaKnown RBP12.95□□□□□ -0.34
CASC4-202ENST00000345795 PROKR1Q8TCW9 393 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 TMBIM1Q969X1 311 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 NXPE3Q969Y0 559 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 FRG2BQ96QU4 278 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 ZNF225Q9UK10 706 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 C7orf72A4D263 438 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
CASC4-202ENST00000345795 MAGEA12P43365 314 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 NUDT6P53370 316 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 RAB8AP61006 207 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 MEX3DQ86XN8 651 aaKnown RBP12.95□□□□□ -0.34
CASC4-202ENST00000345795 P3H2Q8IVL5 708 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 ZCCHC10Q8TBK6 192 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 GTPBP3Q969Y2 492 aaKnown RBP12.95□□□□□ -0.34
CASC4-202ENST00000345795 ARSGQ96EG1 525 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 TRIB3Q96RU7 358 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 SLC13A4Q9UKG4 626 aa12.95□□□□□ -0.34
CASC4-202ENST00000345795 TTC28Q96AY4 2481 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms