RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PPP1R16AQ96I34 528 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 CDRT15Q96T59 188 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 P2RY13Q9BPV8 354 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 DCLRE1BQ9H816 532 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 WDR41Q9HAD4 459 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 PARVBQ9HBI1 364 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 DYRK4Q9NR20 520 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 ANGPTL3Q9Y5C1 460 aa9□□□□□ -0.97
ATG4A-202ENST00000345734 VPS4BO75351 444 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 STK16O75716 305 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ANP32DO95626 131 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 OTCP00480 354 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 FTH1P02794 183 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 APODP05090 189 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 C8GP07360 202 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SNRPB2P08579 225 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ANXA5P08758 320 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GNAZP19086 355 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PBLDP30039 288 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PREPP48147 710 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 TRPC1P48995 793 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MTTPP55157 894 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ABRQ12979 859 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CDC16Q13042 620 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ABRAXAS2Q15018 415 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SLC44A4Q53GD3 710 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CCDC92Q53HC0 331 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 C6orf163Q5TEZ5 329 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 RAET1GQ6H3X3 334 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 IL27RAQ6UWB1 636 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 Q6ZSR9 355 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 EFL1Q7Z2Z2 1120 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PGAM4Q8N0Y7 254 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MIER2Q8N344 545 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SFRP1Q8N474 314 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 STMN2Q93045 179 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ABHD8Q96I13 439 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 C1orf50Q9BV19 199 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 TRMT61BQ9BVS5 477 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MRPL1Q9BYD6 325 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 YIPF3Q9GZM5 350 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 POMPQ9Y244 141 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 RNF11Q9Y3C5 154 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 STON1Q9Y6Q2 735 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 LOC730098B7Z3J9 87 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 C1QTNF3-AMACRE9PGA6 284 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GFYI3L273 518 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 NR5A2O00482 541 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 FFAR3O14843 346 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MID1O15344 667 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GPR42O15529 346 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SLCO2B1O94956 709 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 EPORP19235 508 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MSX2P35548 267 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 EIF2DP41214 584 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GPR1P46091 355 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PRLHRP49683 370 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ACADVLP49748 655 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GALK1P51570 392 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SH3BGRP55822 239 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CCNIQ14094 377 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 LRP8Q14114 963 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MYBPC3Q14896 1274 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MAPRE2Q15555 327 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 TMEM52BQ4KMG9 183 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 RPS26P11Q5JNZ5 115 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PIP5KL1Q5T9C9 394 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 OGFOD2Q6N063 350 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 LAYNQ6UX15 382 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CHPFQ8IZ52 775 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 RNF148Q8N7C7 305 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 HIPK4Q8NE63 616 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 ASZ1Q8WWH4 475 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PYCR2Q96C36 320 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 TEX37Q96LM6 180 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CCM2Q9BSQ5 444 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 HDAC8Q9BY41 377 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 OR2AG1Q9H205 316 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 SDR39U1Q9NRG7 319 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 FARSBQ9NSD9 589 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 MRGBPQ9NV56 204 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CLDND1Q9NY35 253 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 NOP53Q9NZM5 478 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GULP1Q9UBP9 304 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 CIDEBQ9UHD4 219 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 PRPF19Q9UMS4 504 aaKnown RBP8.99□□□□□ -0.97
ATG4A-202ENST00000345734 FADS3Q9Y5Q0 445 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 GPR45Q9Y5Y3 372 aa8.99□□□□□ -0.97
ATG4A-202ENST00000345734 KPNA5O15131 536 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NRP2O60462 931 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ATG13O75143 517 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 HIST1H2AGP0C0S8 130 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-202ENST00000345734 HIST1H2ADP20671 130 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 NME2P22392 152 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 PDHA2P29803 388 aa8.98□□□□□ -0.97
ATG4A-202ENST00000345734 HMOX2P30519 316 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms