RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PLPPR4Q7Z2D5 763 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 TRIM43Q96BQ3 446 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FEM1CQ96JP0 617 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 NECAB3Q96P71 396 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-201ENST00000345617 TMEM209Q96SK2 561 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CDT1Q9H211 546 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 NDUFAF4Q9P032 175 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 MON2Q7Z3U7 1717 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 SEC16AO15027 2179 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 GKN3PP0CG01 181 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 MPIP34949 423 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 GNMTQ14749 295 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CLEC6AQ6EIG7 209 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 SLC22A17Q8WUG5 538 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CSPG4P5Q96PW8 444 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FERD3LQ96RJ6 166 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 TMPRSS4Q9NRS4 437 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 KIDINS220Q9ULH0 1771 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 TBX10O75333 385 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 RPL13AP3Q6NVV1 102 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CENPSQ8N2Z9 138 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 GAD1Q99259 594 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 C7orf50Q9BRJ6 194 aaKnown RBP18.98■□□□□ 0.63
HDAC4-201ENST00000345617 P2RX2Q9UBL9 471 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 C2orf80Q0P641 193 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 GPR158Q5T848 1215 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 WASF2Q9Y6W5 498 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FAM189A1O60320 539 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 JAM2P57087 298 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 SF1Q15637 639 aaKnown RBP18.98■□□□□ 0.63
HDAC4-201ENST00000345617 LRRC57Q8N9N7 239 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 C7orf57Q8NEG2 295 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 PHOX2BQ99453 314 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 SMPD4Q9NXE4 827 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 A0A0G2JMP0 313 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FMO3P31513 532 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 GABARAPL2P60520 117 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FADDQ13158 208 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CDK10Q15131 360 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 OR4M2Q8NGB6 313 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 BTBD1Q9H0C5 482 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 IL17RBQ9NRM6 502 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 FAM149AA5PLN7 773 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 PPM1AP35813 382 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 RHBDF2Q6PJF5 856 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 TBATAQ96M53 351 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 CPSF4LA6NMK7 179 aaKnown RBP18.97■□□□□ 0.63
HDAC4-201ENST00000345617 hCG_2039718K7EN88 272 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 DNAJB6O75190 326 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 IL1BP01584 269 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 CMPK1P30085 196 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 SCIMPQ6UWF3 145 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 CD300LFQ8TDQ1 290 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 TP73O15350 636 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 RCBTB2O95199 551 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ENY2Q9NPA8 101 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 PHPT1Q9NRX4 125 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-201ENST00000345617 GPR135Q8IZ08 494 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 FOLH1BQ9HBA9 442 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 BPIFA1Q9NP55 256 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 OR2AG2A6NM03 316 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 NOBOXO60393 691 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ADRB2P07550 413 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 RABL3Q5HYI8 236 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 LCLAT1Q6UWP7 414 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 PIGZQ86VD9 579 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 OXSMQ9NWU1 459 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ERVK-11Q9UQG0 969 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 TTC34A8MYJ7 566 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ADAMTS3O15072 1205 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 B4GALT4O60513 344 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 VAMP1P23763 118 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 NRG1Q02297 640 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-201ENST00000345617 HSDL1Q3SXM5 330 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ANKDD1AQ495B1 522 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 GID4Q8IVV7 300 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 AVL9Q8NBF6 648 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 METTL21AQ8WXB1 218 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 TNFRSF25Q93038 417 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 AZIN2Q96A70 460 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 AGRPO00253 132 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 PTTG1O95997 202 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 MCCD1P59942 119 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-201ENST00000345617 CTC1Q2NKJ3 1217 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 C16orf59Q7L2K0 433 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 SNX10Q9Y5X0 201 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 HSBP1L1C9JCN9 74 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 CXCL11O14625 94 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 AKR1A1P14550 325 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF514Q96K75 400 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-201ENST00000345617 TLR4O00206 839 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 TOR1BO14657 336 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ARPC2O15144 300 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 FASTKD3Q14CZ7 662 aaKnown RBP18.96■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF367Q7RTV3 350 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 PLD5Q8N7P1 536 aa18.96■□□□□ 0.63
HDAC4-201ENST00000345617 SETD6Q8TBK2 473 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms