RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TMEM150CB9EJG8 249 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 DIRAS3O95661 229 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CALCAP01258 141 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CCND3P30281 292 aaPredicted RBP17.29■□□□□ 0.36
SMAD4-201ENST00000342988 WDR53Q7Z5U6 358 aaPredicted RBP17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SLC5A5Q92911 643 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 TMED9Q9BVK6 235 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SDHAF2Q9NX18 166 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CMAHPQ9Y471 501 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 PDLIM1O00151 329 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SNX3O60493 162 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 H6PDO95479 791 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 APODP05090 189 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 LTKP29376 864 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SMYD5Q6GMV2 418 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SLC3A1Q07837 685 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 C16orf46Q6P387 395 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 FAM129CQ86XR2 697 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 GALNT12Q8IXK2 581 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
SMAD4-201ENST00000342988 RAB11FIP5Q9BXF6 653 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 AGXTP21549 392 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 FMO3P31513 532 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 RPIAP49247 311 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 IFI44LQ53G44 452 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 IQCHQ86VS3 1027 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF584Q8IVC4 421 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 MALT1Q9UDY8 824 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 PLGLAQ15195 96 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 DPYSL2Q16555 572 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CCDC32Q9BV29 185 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 OR2B2Q9GZK3 357 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 GTF2IRD1Q9UHL9 959 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 COL6A2P12110 1019 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 BNIP3Q12983 259 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 DHCR24Q15392 516 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 FAM199XQ6PEV8 388 aaPredicted RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 NUDT4Q9NZJ9 180 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 PRPH2P23942 346 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CLCN3P51790 818 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF41P51814 821 aaPredicted RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF616Q08AN1 781 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 PTPN20Q4JDL3 420 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 SLC8B1Q6J4K2 584 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 KIF18BQ86Y91 864 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 GPR151Q8TDV0 419 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 USP29Q9HBJ7 922 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 BPIFA1Q9NP55 256 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 C20orf202A1L168 122 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 LRRN3E7EW58 273 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CHRNB4P30926 498 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 SLC20A2Q08357 652 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 IL23RQ5VWK5 629 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 FRZBQ92765 325 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 LRRN3Q9H3W5 708 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ERVW-1Q9UQF0 538 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CAPN8A6NHC0 703 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF705FA8MVS1 300 aaPredicted RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 OIP5O43482 229 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 COQ9O75208 318 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ATP6AP2O75787 350 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 MT-ND5P03915 603 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF705DP0CH99 300 aaPredicted RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF705BP0CI00 300 aaPredicted RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 TIGD2Q4W5G0 525 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CRB2Q5IJ48 1285 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 ALLCQ8N6M5 410 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 BRINP1O60477 761 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 STK16O75716 305 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 DPP6P42658 865 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CDH12P55289 794 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 CLRN1P58418 232 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 GTF2H2Q13888 395 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 GTF2H2CQ6P1K8 395 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
SMAD4-201ENST00000342988 MTFR1LQ9H019 292 aa17.28■□□□□ 0.36
SMAD4-201ENST00000342988 C5orf60A6NFR6 353 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 RCBTB2O95199 551 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 HDCP19113 662 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 IDSP22304 550 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CHST9Q7L1S5 443 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 FAM86B1Q8N7N1 296 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SLC35G5Q96KT7 338 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 TDP1Q9NUW8 608 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 GNG8Q9UK08 70 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 AGO1Q9UL18 857 aaKnown RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 DNMT3AQ9Y6K1 912 aaPredicted RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms