RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ASB9Q96DX5 294 aa19.41■□□□□ 0.7
RTN1-202ENST00000342503 C1QTNF2Q9BXJ5 285 aa19.41■□□□□ 0.7
RTN1-202ENST00000342503 SERTM1A2A2V5 107 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 DRD1P21728 446 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 JAK1P23458 1154 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 FOXM1Q08050 763 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 SGCGQ13326 291 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 DOC2AQ14183 400 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 TRIM25Q14258 630 aaKnown RBP19.4■□□□□ 0.7
RTN1-202ENST00000342503 PTGR1Q14914 329 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 KIAA0040Q15053 153 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 IER5LQ5T953 404 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 CACHD1Q5VU97 1274 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 FRG2Q64ET8 278 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 KIAA1161Q6NSJ0 714 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 RNF111Q6ZNA4 994 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 OXR1Q8N573 874 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 FRG2BQ96QU4 278 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 PCDHAC1Q9H158 963 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 WDR26Q9H7D7 661 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 C8orf33Q9H7E9 229 aaPredicted RBP19.4■□□□□ 0.7
RTN1-202ENST00000342503 TM7SF3Q9NS93 570 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 GMPR2Q9P2T1 348 aaKnown RBP19.4■□□□□ 0.7
RTN1-202ENST00000342503 ABCD2Q9UBJ2 740 aa19.4■□□□□ 0.7
RTN1-202ENST00000342503 H3BNX3 289 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 PRPH2P23942 346 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 TRIM23P36406 574 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 CASP2P42575 452 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 ADPRHP54922 357 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 GRSF1Q12849 480 aaKnown RBP eCLIP19.39■□□□□ 0.7
RTN1-202ENST00000342503 RPA4Q13156 261 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 TMEM259Q4ZIN3 620 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 USP39Q53GS9 565 aaKnown RBP19.39■□□□□ 0.7
RTN1-202ENST00000342503 SUSD1Q6UWL2 747 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 UNC5DQ6UXZ4 953 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 SYTL1Q8IYJ3 562 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 SLC44A3Q8N4M1 653 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.7
RTN1-202ENST00000342503 SLC17A9Q9BYT1 436 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 KCNK12Q9HB15 430 aa19.39■□□□□ 0.7
RTN1-202ENST00000342503 SPTBN5Q9NRC6 3674 aaKnown RBP19.39■□□□□ 0.7
RTN1-202ENST00000342503 DYTNA2CJ06 578 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 NME4O00746 187 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 POU3F3P20264 500 aaPredicted RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 SLC6A2P23975 617 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 VARSP26640 1264 aaKnown RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 TBPL1P62380 186 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 YBX1P67809 324 aaKnown RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 PCDH1Q08174 1060 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 GRHL2Q6ISB3 625 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 CAPN13Q6MZZ7 669 aaPredicted RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 SLC2A7Q6PXP3 512 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 PDZD3Q86UT5 571 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 SLC15A3Q8IY34 581 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 RNF175Q8N4F7 328 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 LMNTD1Q8N9Z9 388 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 CMTM7Q96FZ5 175 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 ZBTB18Q99592 522 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 PRO3102Q9H379 93 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 PHPT1Q9NRX4 125 aaPredicted RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 CMTM6Q9NX76 183 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
RTN1-202ENST00000342503 DNMT3AQ9Y6K1 912 aaPredicted RBP19.39■□□□□ 0.69
RTN1-202ENST00000342503 IFRD1O00458 451 aaPredicted RBP19.38■□□□□ 0.69
RTN1-202ENST00000342503 KMOO15229 486 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 BCKDHAP12694 445 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 DGKQP52824 942 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 MRPS21P82921 87 aaKnown RBP19.38■□□□□ 0.69
RTN1-202ENST00000342503 TRAP1Q12931 704 aaKnown RBP19.38■□□□□ 0.69
RTN1-202ENST00000342503 MAP7D1Q3KQU3 841 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 GALNT13Q8IUC8 556 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 PHC3Q8NDX5 983 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 WDR20Q8TBZ3 569 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 DPY30Q9C005 99 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 NMRK1Q9NWW6 199 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 GPRC5BQ9NZH0 403 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 SLAMF8Q9P0V8 285 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 PSMD13Q9UNM6 376 aa19.38■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3DA0A087WVF3 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3IA0A087WXS9 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3EA0A087X179 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3KA0A087X1G2 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3FA6NER0 549 aaPredicted RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3LB9A6J9 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 NPIPB8E9PQR5 432 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 NVLO15381 856 aaKnown RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3HP0C7X1 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 HNF4AP41235 474 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 MRPS22P82650 360 aaKnown RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 TSTA3Q13630 321 aaPredicted RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3GQ6DHY5 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3CQ6IPX1 549 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 DHDDSQ86SQ9 333 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 HORMAD1Q86X24 394 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 LRRC56Q8IYG6 542 aaPredicted RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 TBC1D3Q8IZP1 549 aaPredicted RBP19.37■□□□□ 0.69
RTN1-202ENST00000342503 DNASE1L2Q92874 299 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 TMEM125Q96AQ2 219 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 SIPA1Q96FS4 1042 aa19.37■□□□□ 0.69
RTN1-202ENST00000342503 APIPQ96GX9 242 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms