RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 MAF1Q9H063 256 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SLC22A1O15245 554 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SOX14O95416 240 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SBK3P0C264 359 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 HTR1EP28566 365 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 GSTM5P46439 218 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 IL18R1Q13478 541 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SEMA3AQ14563 771 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 ZSWIM7Q19AV6 140 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 TMEM207Q6UWW9 146 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 IGFN1Q86VF2 1251 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 KRT73Q86Y46 540 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 DIRAS2Q96HU8 199 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 BBS4Q96RK4 519 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 RNF208Q9H0X6 261 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 FZD4Q9ULV1 537 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 ASF1AQ9Y294 204 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 CCDC182A6NF36 153 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 NEDD8-MDP1E9PL57 170 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 M0QX08 132 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SLC1A7O00341 560 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 ERN1O75460 977 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 LCKP06239 509 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 NR2F1P10589 423 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 BCKDHAP12694 445 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 CD247P20963 164 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 PPP2R1BP30154 601 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SHMT2P34897 504 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 CLCN2P51788 898 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 MANFP55145 182 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 PON2Q15165 354 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SMN1Q16637 294 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 GLB1L3Q8NCI6 653 aaPredicted RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 LGALS12Q96DT0 336 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 COQ7Q99807 217 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 MRM3Q9HC36 420 aaKnown RBP12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 TMEM9Q9P0T7 183 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 SCML2Q9UQR0 700 aa12.13□□□□□ -0.47
SNRNP48-201ENST00000342415 KRT87PA6NCN2 255 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 APOL3O95236 402 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 RGRP47804 291 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ATP4BP51164 291 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 VN1R5Q7Z5H4 357 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 SCML4Q8N228 414 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 UXS1Q8NBZ7 420 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 SGCDQ92629 289 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 WRAP53Q9BUR4 548 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 BEX2Q9BXY8 128 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 YTHDF1Q9BYJ9 559 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 GPR62Q9BZJ7 368 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 RP1L1Q8IWN7 2480 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 M0R129 80 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 MANBAO00462 879 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 PCDH8O95206 1070 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 TMBIM6P55061 237 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 POLR2LP62875 67 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 USP41Q3LFD5 358 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 SLC36A3Q495N2 470 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 TPRG1LQ5T0D9 272 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ANKRD34AQ69YU3 496 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 HMGN2P46Q86SG4 172 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 NETO1Q8TDF5 533 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ASZ1Q8WWH4 475 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ZNF641Q96N77 438 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 EQTNQ9NQ60 294 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 SPG21Q9NZD8 308 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 PRR23D1E9PI22 279 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 CHRNA1P02708 482 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 CSF2P04141 144 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 PRR23D2P0DMB1 279 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 PTNP21246 168 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 DNAJB1P25685 340 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 TBPL2Q6SJ96 375 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 RD3Q7Z3Z2 195 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 SLC7A5P1Q8MH63 180 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 BEND7Q8N7W2 519 aaPredicted RBP12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 OR10G2Q8NGC3 310 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 MAL2Q969L2 176 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 GPR78Q96P69 363 aa12.12□□□□□ -0.47
SNRNP48-201ENST00000342415 NLE1Q9NVX2 485 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms