RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 GPR32O75388 356 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FCGR2AP12318 317 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SSR4P51571 173 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ATXN1P54253 815 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 GBX1Q14549 363 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SOWAHAQ2M3V2 549 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 KLHDC7AQ5VTJ3 777 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SERPINA9Q86WD7 417 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PCYOX1LQ8NBM8 494 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 NACC2Q96BF6 587 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 RMND5BQ96G75 393 aaPredicted RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SNF8Q96H20 258 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 DHRS4Q9BTZ2 278 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MMADHCQ9H3L0 296 aaPredicted RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 TELO2Q9Y4R8 837 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 DNAJB5O75953 348 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ADSSP30520 456 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 GSTM4Q03013 218 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PTCHD3Q3KNS1 767 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FAM45BPQ6NSW5 357 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FAM45AQ8TCE6 357 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PPCDCQ96CD2 204 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FBXL20Q96IG2 436 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 DHRS1Q96LJ7 313 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ZDHHC3Q9NYG2 299 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 TAS2R16Q9NYV7 291 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MTF2Q9Y483 593 aaPredicted RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 C4AP0C0L4 1744 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ANKRD34BA5PLL1 514 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SMPD2O60906 423 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 EPN2O95208 641 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 RPS23P62266 143 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 TEKQ02763 1124 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 BNIP1Q12981 228 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 INTS11Q5TA45 600 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ARMC3Q5W041 872 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 KDELC1Q6UW63 502 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SLC26A9Q7LBE3 791 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 HIPK4Q8NE63 616 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 AGR3Q8TD06 166 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 DPEP3Q9H4B8 488 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ACTL8Q9H568 366 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MOCS1Q9NZB8 636 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SATB2Q9UPW6 733 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PCDHGA1Q9Y5H4 931 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 IRAK3Q9Y616 596 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 OR5K3A6NET4 321 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SH2D7A6NKC9 451 aaPredicted RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 RAB36O95755 333 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PRSS56P0CW18 603 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FPR1P21462 350 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 FPR2P25090 351 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 KYAT3Q6YP21 454 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 STYXQ8WUJ0 223 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 TLR10Q9BXR5 811 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PCDHGB7Q9Y5F8 929 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MAU2Q9Y6X3 613 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 WDR91A4D1P6 747 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SIGLEC16A6NMB1 481 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PHGDHO43175 533 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 OTCP00480 354 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MPIP34949 423 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 ADH7P40394 386 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 MAZP56270 477 aaKnown RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PCDH1Q08174 1060 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 CLEC20AQ6ZU45 233 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 BCL7CQ8WUZ0 217 aaPredicted RBP8.19□□□□□ -1.1
HMGB1-203ENST00000341423 RHNO1Q9BSD3 238 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 PLEKHA1Q9HB21 404 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 TRIM39Q9HCM9 518 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 SLC9A8Q9Y2E8 581 aa8.19□□□□□ -1.1
HMGB1-203ENST00000341423 AREL1O15033 823 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SERPINB7O75635 380 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ACSL3O95573 720 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CHGBP05060 677 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 DPP4P27487 766 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PTGER3P43115 390 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 HNMTP50135 292 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 HK3P52790 923 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SLC29A2Q14542 456 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ATP6AP1LQ52LC2 224 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 FAM220AQ7Z4H9 259 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 PM20D2Q8IYS1 436 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 DACH2Q96NX9 599 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 TRNAU1APQ9NX07 287 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ANGPT4Q9Y264 503 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 ATMINO43313 823 aaPredicted RBP8.18□□□□□ -1.1
HMGB1-203ENST00000341423 STK17BO94768 372 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 LIPCP11150 499 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 CRABP2P29373 138 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 NAA20P61599 178 aa8.18□□□□□ -1.1
HMGB1-203ENST00000341423 MYBPC1Q00872 1141 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms