RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C10orf111Q8N326 155 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 RNF175Q8N4F7 328 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 OSCP1Q8WVF1 389 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 CLP1Q92989 425 aaKnown RBP19.58■□□□□ 0.72
SPG7-202ENST00000341316 MRGPRX3Q96LB0 322 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 DOK1Q99704 481 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 EMILIN2Q9BXX0 1053 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 FAM8A1Q9UBU6 413 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 ERVW-1Q9UQF0 538 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 WNT6Q9Y6F9 365 aa19.58■□□□□ 0.72
SPG7-202ENST00000341316 A0A1W2PPW3 197 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 CTSLP07711 333 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 RHOP08100 348 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 RPS14P62263 151 aaKnown RBP19.57■□□□□ 0.72
SPG7-202ENST00000341316 POLR2LP62875 67 aaKnown RBP19.57■□□□□ 0.72
SPG7-202ENST00000341316 HTRA4P83105 476 aaPredicted RBP19.57■□□□□ 0.72
SPG7-202ENST00000341316 POM121L1PQ3SYA9 428 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 ANKDD1AQ495B1 522 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 RUNDC3AQ59EK9 446 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 ENPP6Q6UWR7 440 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 ZNF420Q8TAQ5 688 aaPredicted RBP19.57■□□□□ 0.72
SPG7-202ENST00000341316 CCDC115Q96NT0 180 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 TBCDQ9BTW9 1192 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 ATG10Q9H0Y0 220 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 FAM83DQ9H4H8 585 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 PCDH12Q9NPG4 1184 aa19.57■□□□□ 0.72
SPG7-202ENST00000341316 CHCHD3Q9NX63 227 aaKnown RBP19.57■□□□□ 0.72
SPG7-202ENST00000341316 TRBV5-3A0A0A0MS03 114 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 FADS2P1A8MWK0 482 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HIST1H2AGP0C0S8 130 aaPredicted RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 MPC1LP0DKB6 136 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HIST1H2ADP20671 130 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 NEDD8Q15843 81 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 BRAT1Q6PJG6 821 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 USP51Q70EK9 711 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 GALNT13Q8IUC8 556 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 THAP11Q96EK4 314 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 AURKBQ96GD4 344 aaPredicted RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 APIPQ96GX9 242 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HIST1H2AHQ96KK5 128 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HIST1H2AJQ99878 128 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 H2AFJQ9BTM1 129 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 PAIP1Q9H074 479 aaKnown RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 ELOVL6Q9H5J4 265 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 SERHLQ9NQF3 203 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 UTS2RQ9UKP6 389 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 TDRKHQ9Y2W6 561 aaKnown RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 MAGED1Q9Y5V3 778 aaPredicted RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 OR2AG2A6NM03 316 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HNRNPCP07910 306 aaKnown RBP eCLIP19.56■□□□□ 0.722e-9■□□□□ 9.6
SPG7-202ENST00000341316 TIMP2P16035 220 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 CD247P20963 164 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 WEE1P30291 646 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 VIPR1P32241 457 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 TTKP33981 857 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 ADARB1P78563 741 aaKnown RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 ZNF77Q15935 545 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 GGTA1PQ4G0N0 100 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 FGD3Q5JSP0 725 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 PLEKHS1Q5SXH7 462 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 Q6ZNX1 250 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 ZNF554Q86TJ5 538 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 MRPL43Q8N983 215 aaKnown RBP19.56■□□□□ 0.72
SPG7-202ENST00000341316 L3MBTL4Q8NA19 623 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 ELMO1Q92556 727 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 FOXJ1Q92949 421 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 ITFG2Q969R8 447 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 TSSK3Q96PN8 268 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HEPHQ9BQS7 1158 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 GORASP2Q9H8Y8 452 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 HPS4Q9NQG7 708 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 PPT2Q9UMR5 302 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 PCDHB14Q9Y5E9 798 aa19.56■□□□□ 0.72
SPG7-202ENST00000341316 H0Y858 1186 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 KIAA0355O15063 1070 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 TCF3P15923 654 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 OTUD3Q5T2D3 398 aaPredicted RBP19.55■□□□□ 0.72
SPG7-202ENST00000341316 TTC23LQ6PF05 361 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 ANKRD46Q86W74 232 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 TCAIMQ8N3R3 496 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 ZNF366Q8N895 744 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 SMYD1Q8NB12 490 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 FBXO30Q8TB52 745 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 EGLN2Q96KS0 407 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 FAM210AQ96ND0 272 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 INPP5KQ9BT40 448 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 BDH2Q9BUT1 245 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 RIOK2Q9BVS4 552 aaKnown RBP19.55■□□□□ 0.72
SPG7-202ENST00000341316 C11orf49Q9H6J7 331 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 FAIMQ9NVQ4 179 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 TULP3O75386 442 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 RAP2AP10114 183 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 ZNF30P17039 623 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 PTPN2P17706 415 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 SDC1P18827 310 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 RECQLP46063 649 aaPredicted RBP19.55■□□□□ 0.72
SPG7-202ENST00000341316 HNMTP50135 292 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 CLDN8P56748 225 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 PFN3P60673 137 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 KIAA0907Q7Z7F0 614 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms