RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MAGEB5Q9BZ81 275 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 OR2AG1Q9H205 316 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 UBTD1Q9HAC8 227 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 PNPLA3Q9NST1 481 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 VSTM2BA6NLU5 285 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 J3KR12 359 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 GPRIN2O60269 458 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 CPP00450 1065 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 ITGA2P17301 1181 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 EEF1A2Q05639 463 aaKnown RBP10.52□□□□□ -0.73
ATXN3-201ENST00000340660 LRMPQ12912 555 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 RPE65Q16518 533 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 SLC5A12Q1EHB4 618 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 CLEC12BQ2HXU8 276 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 FBLN7Q53RD9 439 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 CMPK2Q5EBM0 449 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 LRRC66Q68CR7 880 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 FBXO42Q6P3S6 717 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 B3GNT6Q6ZMB0 384 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 IL17RELQ6ZVW7 336 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 IGFBPL1Q8WX77 278 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 KAT5Q92993 513 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF396Q96N95 335 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-201ENST00000340660 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-201ENST00000340660 OLFM1Q99784 485 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 TIMM29Q9BSF4 260 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 PITPNM3Q9BZ71 974 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 KBTBD4Q9NVX7 518 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 FBXO2Q9UK22 296 aaPredicted RBP10.52□□□□□ -0.73
ATXN3-201ENST00000340660 ADAMTS6Q9UKP5 1117 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 FREM1Q5H8C1 2179 aa10.52□□□□□ -0.73
ATXN3-201ENST00000340660 LOC100653049A0A140TA62 436 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CHUKO15111 745 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 KRT34O76011 436 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 SP1P08047 785 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 KRT13P13646 458 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CASP1P29466 404 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 RAB28P51157 221 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 TAP2Q03519 686 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 ENPEPQ07075 957 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 MESDQ14696 234 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 GXYLT1Q4G148 440 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CBWD6Q4V339 395 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CBWD3Q5JTY5 395 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CBWD5Q5RIA9 395 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 FCRLBQ6BAA4 426 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 CNNM4Q6P4Q7 775 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 UNC5DQ6UXZ4 953 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 UNC13DQ70J99 1090 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 FAM131BQ86XD5 332 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF547Q8IVP9 402 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 PDILTQ8N807 584 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 OR5M9Q8NGP3 310 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 SLC20A1Q8WUM9 679 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 SCRN2Q96FV2 425 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 C12orf65Q9H3J6 166 aaKnown RBP10.51□□□□□ -0.73
ATXN3-201ENST00000340660 DTLQ9NZJ0 730 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 B4GALT7Q9UBV7 327 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 NXT1Q9UKK6 140 aaKnown RBP10.51□□□□□ -0.73
ATXN3-201ENST00000340660 EPN1Q9Y6I3 576 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-201ENST00000340660 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
ATXN3-201ENST00000340660 DSCAMO60469 2012 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 IGHV1-45A0A0A0MS14 117 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 A0A1W2PQ72 361 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 GRID2IPA4D2P6 1211 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 WASH4PA8MWX3 477 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 TFECO14948 347 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 HS6ST1O60243 411 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 NEURL1O76050 574 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 PDE9AO76083 593 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 LRIG2O94898 1065 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 BMP15O95972 392 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 CTPS1P17812 591 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 PRDX3P30048 256 aaKnown RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 KRT9P35527 623 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 HALP42357 657 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 ATP5J2P56134 94 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 KLC1Q07866 573 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 FASTKQ14296 549 aaKnown RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 ALG1LQ6GMV1 187 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 ARHGAP11AQ6P4F7 1023 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 SLC26A9Q7LBE3 791 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 POU5F2Q8N7G0 328 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 N4BP2L2Q92802 583 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 HRASLS5Q96KN8 279 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 MBNL3Q9NUK0 354 aaKnown RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 ZNF701Q9NV72 531 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 CFAP20Q9Y6A4 193 aaKnown RBP10.5□□□□□ -0.73
ATXN3-201ENST00000340660 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
ATXN3-201ENST00000340660 RYR2Q92736 4967 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 PDXKO00764 312 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 KMOO15229 486 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 PDIA4P13667 645 aaKnown RBP10.49□□□□□ -0.73
ATXN3-201ENST00000340660 TBXAS1P24557 533 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-201ENST00000340660 RFC3P40938 356 aa10.49□□□□□ -0.73
ATXN3-201ENST00000340660 CARSP49589 748 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms