RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 HMGCLL1Q8TB92 370 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 INPP5DQ92835 1189 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 FAM60AQ9NP50 221 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 MRFAP1Q9Y605 127 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 UBR5O95071 2799 aaPredicted RBP14.85□□□□□ -0.03
VAPA-201ENST00000340541 A0A0J9YY10 115 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 LOC101059948A0A1B0GTJ6 334 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 ISM1B1AKI9 464 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 HCRTR1O43613 425 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 VPS26AO75436 327 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 MPC1LP0DKB6 136 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 ERGP11308 486 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 STAT5AP42229 794 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 MC1RQ01726 317 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 KCNAB2Q13303 367 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 TTLL9Q3SXZ7 439 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 TTC23LQ6PF05 361 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 CPNE9Q8IYJ1 553 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 GALNT6Q8NCL4 622 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 OR1L3Q8NH93 324 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 GABPB2Q8TAK5 448 aaPredicted RBP14.84□□□□□ -0.03
VAPA-201ENST00000340541 FBXO25Q8TCJ0 367 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 ZNF592Q92610 1267 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 FOPNLQ96NB1 174 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 LRRC1Q9BTT6 524 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 CHRNA10Q9GZZ6 450 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 RAB17Q9H0T7 212 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 GPN2Q9H9Y4 310 aaPredicted RBP14.84□□□□□ -0.03
VAPA-201ENST00000340541 PPANQ9NQ55 473 aaKnown RBP14.84□□□□□ -0.03
VAPA-201ENST00000340541 SLC39A10Q9ULF5 831 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 UTP11Q9Y3A2 253 aaKnown RBP14.84□□□□□ -0.03
VAPA-201ENST00000340541 PSAT1Q9Y617 370 aa14.84□□□□□ -0.03
VAPA-201ENST00000340541 A0A1W2PPV9 198 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 H3BMH7 237 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 PYCARD-AS1I3L0S3 204 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 GFYI3L273 518 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 MYO1CO00159 1063 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 EIF3FO00303 357 aaPredicted RBP14.83□□□□□ -0.04
VAPA-201ENST00000340541 EIF3HO15372 352 aaKnown RBP eCLIP14.83□□□□□ -0.04
VAPA-201ENST00000340541 C1QAP02745 245 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 CBSLP0DN79 551 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 ENO3P13929 434 aaPredicted RBP14.83□□□□□ -0.04
VAPA-201ENST00000340541 MCM3P25205 808 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 CBSP35520 551 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 PLTPP55058 493 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 POLE2P56282 527 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SLC7A5Q01650 507 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 MGAT5Q09328 741 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 CYP2A13Q16696 494 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 PRAMEF17Q5VTA0 474 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 C6orf15Q6UXA7 325 aaPredicted RBP14.83□□□□□ -0.04
VAPA-201ENST00000340541 PIWIL4Q7Z3Z4 852 aaKnown RBP14.83□□□□□ -0.04
VAPA-201ENST00000340541 TAX1BP1Q86VP1 789 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 ESX1Q8N693 406 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SLC38A9Q8NBW4 561 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 FBXO15Q8NCQ5 510 aaPredicted RBP14.83□□□□□ -0.04
VAPA-201ENST00000340541 OR9A1PQ8NGU1 263 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 OR8K5Q8NH50 307 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 MAGEC3Q8TD91 643 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 ASB11Q8WXH4 323 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SEC14L1Q92503 715 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 TCTN2Q96GX1 697 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 MCMBPQ9BTE3 642 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 RAB11FIP5Q9BXF6 653 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 PHACTR1Q9C0D0 580 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SYTL2Q9HCH5 934 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SAYSD1Q9NPB0 183 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SMYD2Q9NRG4 433 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 SPATA7Q9P0W8 599 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 LNPEPQ9UIQ6 1025 aa14.83□□□□□ -0.04
VAPA-201ENST00000340541 ESYT3A0FGR9 886 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 TUBB4AP04350 444 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 NTRK1P04629 796 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 MAGP20916 626 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 F8A1P23610 371 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 SSTR1P30872 391 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PGGT1BP53609 377 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 NFKB2Q00653 900 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 CAV1Q03135 178 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 FASTKQ14296 549 aaKnown RBP14.82□□□□□ -0.04
VAPA-201ENST00000340541 C8orf74Q6P047 294 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PAQR3Q6TCH7 311 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 MMGT1Q8N4V1 131 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 DNAJC22Q8N4W6 341 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 OR2A1Q8NGT9 310 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PYROXD1Q8WU10 500 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 DLG3Q92796 817 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 SLC22A18Q96BI1 424 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PKP4Q99569 1192 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 OLFM1Q99784 485 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 AKIRIN1Q9H9L7 192 aaPredicted RBP14.82□□□□□ -0.04
VAPA-201ENST00000340541 TAS2R13Q9NYV9 303 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 ZFATQ9P243 1243 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 TRMT6Q9UJA5 497 aaKnown RBP14.82□□□□□ -0.04
VAPA-201ENST00000340541 ANAPC2Q9UJX6 822 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 CORO1CQ9ULV4 474 aaPredicted RBP14.82□□□□□ -0.04
VAPA-201ENST00000340541 KLHL20Q9Y2M5 609 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PCDHB3Q9Y5E6 796 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 SEC16AO15027 2179 aa14.82□□□□□ -0.04
VAPA-201ENST00000340541 PCM1Q15154 2024 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms