RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 FBXO5Q9UKT4 447 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 WASHC1A8K0Z3 465 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ABHD2P08910 425 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ANXA4P09525 319 aaPredicted RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 TFPTP0C1Z6 253 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CLCN4P51793 760 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CCL23P55773 120 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SEC23BQ15437 767 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 NIPAL1Q6NVV3 410 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SLC39A4Q6P5W5 647 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 WASH2PQ6VEQ5 465 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 FABP6P51161 128 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 AFF3P51826 1226 aaKnown RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 MTPNP58546 118 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 MERTKQ12866 999 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 FAM174BQ3ZCQ3 159 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ZNF808Q8N4W9 903 aaPredicted RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 OR8K3Q8NH51 312 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ATG4CQ96DT6 458 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 MAELQ96JY0 434 aaKnown RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 SULT4A1Q9BR01 284 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TMED5Q9Y3A6 229 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3IA0A087WXS9 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3EA0A087X179 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3KA0A087X1G2 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3FA6NER0 549 aaPredicted RBP12.58□□□□□ -0.39
USP47-202ENST00000339865 MAGEB17A8MXT2 336 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 K7EPK0 472 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 CTSOP43234 321 aaPredicted RBP12.58□□□□□ -0.39
USP47-202ENST00000339865 MAMLD1Q13495 774 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3GQ6DHY5 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.39
USP47-202ENST00000339865 C12orf45Q8N5I9 185 aaPredicted RBP12.58□□□□□ -0.39
USP47-202ENST00000339865 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 GIMAP5Q96F15 307 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 WASF3Q9UPY6 502 aa12.58□□□□□ -0.39
USP47-202ENST00000339865 NPIPA7E9PJI5 369 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 F8W036 122 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PDYNP01213 254 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 NPIPA8P0DM63 369 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 MLLT1Q03111 559 aaPredicted RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 TROAPQ12815 778 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PHOX2BQ99453 314 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 SAMD10Q9BYL1 202 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 COLEC10Q9Y6Z7 277 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 CXCR6O00574 342 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 MAP2K7O14733 419 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 TXNL1O43396 289 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 EDF1O60869 148 aaKnown RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 ATG13O75143 517 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 IL7P13232 177 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PIK3CBP42338 1070 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 AMZ1Q400G9 498 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 TMEM164Q5U3C3 297 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 RHBDF1Q96CC6 855 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 LENG8Q96PV6 779 aaPredicted RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 ZNF282Q9UDV7 671 aaPredicted RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 ELAVL2Q12926 359 aaKnown RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 GTF2H2Q13888 395 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 GTF2H2CQ6P1K8 395 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 VSTM1Q6UX27 236 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 ANKS1BQ7Z6G8 1248 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 CNTD1Q8N815 330 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 LGMNQ99538 433 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 ARL6Q9H0F7 186 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PPA2Q9H2U2 334 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 MAN2C1Q9NTJ4 1040 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PCDHGB6Q9Y5F9 930 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 RGL2O15211 777 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 RFPL1O75677 317 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 IFNA5P01569 189 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 FGL2Q14314 439 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 DUPD1Q68J44 220 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 CFAP52Q8N1V2 620 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 NETO2Q8NC67 525 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
USP47-202ENST00000339865 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 OR1F1O43749 312 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 CAPN3P20807 821 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 HSPA7P48741 367 aa12.58□□□□□ -0.4
USP47-202ENST00000339865 GPR158Q5T848 1215 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms