RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DCAF4L2Q8NA75 395 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 RHOXF1Q8NHV9 184 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 RORBQ92753 470 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 C2orf49Q9BVC5 232 aaPredicted RBP18.33■□□□□ 0.53
PSPC1-201ENST00000338910 GPR63Q9BZJ6 419 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 SLIRPQ9GZT3 109 aaKnown RBP18.33■□□□□ 0.53
PSPC1-201ENST00000338910 SYTL2Q9HCH5 934 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 SEMA4BQ9NPR2 832 aaPredicted RBP18.33■□□□□ 0.53
PSPC1-201ENST00000338910 IKZF3Q9UKT9 509 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 TLL1O43897 1013 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 NIPSNAP2O75323 286 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 KATNA1O75449 491 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 SPRED2Q7Z698 418 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 P2RY8Q86VZ1 359 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 ZFAND4Q86XD8 727 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 SVOPLQ8N434 492 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 FBLIM1Q8WUP2 373 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 PPM1MQ96MI6 270 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 RAD9AQ99638 391 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 TRPV5Q9NQA5 729 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 EXD2Q9NVH0 621 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 HCFC1R1Q9NWW0 138 aa18.33■□□□□ 0.52
PSPC1-201ENST00000338910 PSMD11O00231 422 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 XPNPEP2O43895 674 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 FZD6O60353 706 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CRCPO75575 148 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CST1P01037 141 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 PSMA3P25788 255 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CD6P30203 668 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 RYKP34925 604 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CTNNB1P35222 781 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 ERVK-8P63133 956 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 SLC13A2Q13183 592 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 LRIT3Q3SXY7 679 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 ARMC12Q5T9G4 340 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 RETSATQ6NUM9 610 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 PRR23BQ6ZRT6 265 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 HTR3DQ70Z44 454 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 MMAAQ8IVH4 418 aaKnown RBP18.32■□□□□ 0.52
PSPC1-201ENST00000338910 OR2T11Q8NH01 316 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 UGT2B28Q9BY64 529 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 TFB2MQ9H5Q4 396 aaKnown RBP18.32■□□□□ 0.52
PSPC1-201ENST00000338910 PKP3Q9Y446 797 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 M0QX08 132 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 SNX2O60749 519 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 GLUD1P00367 558 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CD70P32970 193 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CCR2P41597 374 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 TTPAP49638 278 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 RAD51Q06609 339 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 LMAN2Q12907 356 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 CDK5R2Q13319 367 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
PSPC1-201ENST00000338910 ENPP6Q6UWR7 440 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 FAM217AQ8IXS0 508 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 ELMOD1Q8N336 334 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 SIDT2Q8NBJ9 832 aaKnown RBP18.32■□□□□ 0.52
PSPC1-201ENST00000338910 NUSAP1Q9BXS6 441 aaKnown RBP18.32■□□□□ 0.52
PSPC1-201ENST00000338910 EMILIN2Q9BXX0 1053 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 SLC46A2Q9BY10 475 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 DSN1Q9H410 356 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 SLCO3A1Q9UIG8 710 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 C3orf18Q9UK00 162 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 RNF112Q9ULX5 631 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 DENND4CQ5VZ89 1909 aa18.32■□□□□ 0.52
PSPC1-201ENST00000338910 ISPDA4D126 451 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 A8MX80 341 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 CDC7O00311 574 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PKMP14618 531 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PRDX3P30048 256 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 BMPR1AP36894 532 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 NCS1P62166 190 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PRKG2Q13237 762 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 LAPTM5Q13571 262 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 SPESP1Q6UW49 350 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 FKBP9P1Q75LS8 142 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PRSS48Q7RTY5 328 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 Q8N9G6 341 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PSMA8Q8TAA3 256 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 CNIH3Q8TBE1 160 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 STAG3L4Q8TBR4 150 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 MCOLN3Q8TDD5 553 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PIH1D2Q8WWB5 315 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 KIAA1191Q96A73 305 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 CCDC115Q96NT0 180 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 SARS2Q9NP81 518 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 TMEM45AQ9NWC5 275 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 IL17CQ9P0M4 197 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 TRAV19A0A0A6YYK7 116 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 IQCF5A8MTL0 148 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 SUPT3HB4E1H0 165 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 RGS13O14921 159 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 RFPL2O75678 378 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 UPK1BO75841 260 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PGLSO95336 258 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 SYN1P17600 705 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 SLC7A9P82251 487 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms