RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TAP2Q03519 686 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 DLG1Q12959 904 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 EIF3IQ13347 325 aaKnown RBP11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 NAE1Q13564 534 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 TGFBIQ15582 683 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC5A12Q1EHB4 618 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 THEMIS2Q5TEJ8 643 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 SPESP1Q6UW49 350 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 TMPRSS9Q7Z410 1059 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 PRSS42Q7Z5A4 293 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 B3GNT8Q7Z7M8 397 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 KMT5CQ86Y97 462 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 CENPLQ8N0S6 344 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 CYP4X1Q8N118 509 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 TCAIMQ8N3R3 496 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 AGBL5Q8NDL9 886 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 RHEBL1Q8TAI7 183 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 ALKBH8Q96BT7 664 aaKnown RBP11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 OR2A14Q96R47 310 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 MAP3K3Q99759 626 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 SPHK1Q9NYA1 384 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 CD274Q9NZQ7 290 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 STOX2Q9P2F5 926 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 LGALS13Q9UHV8 139 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 PIKFYVEQ9Y2I7 2098 aa11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 MN1Q10571 1320 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-202ENST00000337841 A0A1W2PPM1 405 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 KRT87PA6NCN2 255 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 RGS16O15492 202 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 KIF1CO43896 1103 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 PRICKLE3O43900 615 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 KERAO60938 352 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CCNDBP1O95273 360 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ZBTB11O95625 1053 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 GSTA1P08263 222 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ADRB1P08588 477 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ANKRD34CP0C6C1 535 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 IMPA1P29218 277 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CMPK1P30085 196 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 GMPRP36959 345 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 GLRBP48167 497 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 SEPHS1P49903 392 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ABATP80404 500 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 FASTKQ14296 549 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 NAA25Q14CX7 972 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 OR4D1Q15615 310 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 PPP1R3AQ16821 1122 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CEP85LQ5SZL2 805 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 TMTC4Q5T4D3 741 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 SULT1C3Q6IMI6 304 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CAPN13Q6MZZ7 669 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 SUSD1Q6UWL2 747 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 PLD6Q8N2A8 252 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 FBXO39Q8N4B4 442 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 LMNTD1Q8N9Z9 388 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 WDR36Q8NI36 951 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 MZB1Q8WU39 189 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 KLHL6Q8WZ60 621 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ZUFSPQ96AP4 578 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 PTERQ96BW5 349 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 MED8Q96G25 268 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 LIN37Q96GY3 246 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 GPR78Q96P69 363 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ZIM3Q96PE6 472 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 RUFY1Q96T51 708 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 MIPEPQ99797 713 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 MRPL57Q9BQC6 102 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 TWSG1Q9GZX9 223 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ATG10Q9H0Y0 220 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CNOT10Q9H9A5 744 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 CCDC177Q9NQR7 707 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 ABCF3Q9NUQ8 709 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 EURLQ9NYK6 297 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 TMCO1Q9UM00 188 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 BPTFQ12830 3046 aa11.5□□□□□ -0.57
SPTLC1-202ENST00000337841 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 A0A0J9YY10 115 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SLC9B1P1A6NJY1 282 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SUPT3HB4E1H0 165 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 TARM1B6A8C7 271 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 MAP2K7O14733 419 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 SUPT3HO75486 399 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 NELFEP18615 380 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 HRH2P25021 359 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 KCNC1P48547 511 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 PPP1CAP62136 330 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 HSD11B2P80365 405 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 PRDX1Q06830 199 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 ZNF844Q08AG5 666 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 CASP8Q14790 479 aa11.49□□□□□ -0.57
SPTLC1-202ENST00000337841 CYB5D1Q6P9G0 228 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms