RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 INMTO95050 263 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 KLKB1P03952 638 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 FMO3P31513 532 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 HSPA14Q0VDF9 509 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 MAD2L1Q13257 205 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 PLD1Q13393 1074 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 AADATQ8N5Z0 425 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 ESX1Q8N693 406 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 SLC22A17Q8WUG5 538 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 RORBQ92753 470 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 GTF2H4Q92759 462 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 EGLN2Q96KS0 407 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 HEBP1Q9NRV9 189 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 TMEM9Q9P0T7 183 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 ANKMY1Q9P2S6 941 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 MKI67P46013 3256 aaKnown RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 UPK3BL1B0FP48 263 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 UPK3BL2E5RIL1 263 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 SNPHO15079 494 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 COCHO43405 550 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 CREG1O75629 220 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 CLPXO76031 633 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 TMBIM6P55061 237 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 NKG7Q16617 165 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 GALNT10Q86SR1 603 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 RIMKLAQ8IXN7 391 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 BBS2Q9BXC9 721 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 KIF17Q9P2E2 1029 aa16.13■□□□□ 0.17
CDC42EP4-201ENST00000335793 MITFO75030 526 aaPredicted RBP16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CYBAP13498 195 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CLCN7P51798 805 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 ARHGEF6Q15052 776 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 RBM48Q5RL73 367 aaKnown RBP16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 SBSNQ6UWP8 590 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 USP51Q70EK9 711 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 UBE2Q1Q7Z7E8 422 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 ADCK1Q86TW2 530 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 OR7A2PQ8NGA2 310 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 RASSF1Q9NS23 344 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CLDN7O95471 211 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CPSF4O95639 269 aaKnown RBP16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 ANGPTL1O95841 491 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 KRT6AP02538 564 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 KRT6BP04259 564 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 KRT6CP48668 564 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CLCN4P51793 760 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 PON2Q15165 354 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 PXDC1Q5TGL8 231 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 ANGPTL8Q6UXH0 198 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 TAS1R1Q7RTX1 841 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 SLCO6A1Q86UG4 719 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 MICU2Q8IYU8 434 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZCCHC7Q8N3Z6 543 aaKnown RBP16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 OR8J3Q8NGG0 315 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 NETO1Q8TDF5 533 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 TUBA1CQ9BQE3 449 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 FEM1AQ9BSK4 669 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 AMBRA1Q9C0C7 1298 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 MAGEE1Q9HCI5 957 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 CDH7Q9ULB5 785 aa16.12■□□□□ 0.17
CDC42EP4-201ENST00000335793 EVPLLA8MZ36 301 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 hCG_2039718K7EN88 272 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 UPK1AO00322 258 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SLC28A1O00337 649 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 BCKDKO14874 412 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 HOXC11O43248 304 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 KLK8O60259 260 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 JRKO75564 520 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 NADKO95544 446 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 B3GALT4O96024 378 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 IFI30P13284 250 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ENPP1P22413 925 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SPOUT1Q5T280 376 aaKnown RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CADM2Q8N3J6 435 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ATG16L2Q8NAA4 619 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ABHD11Q8NFV4 315 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 LKAAEAR1Q8TD35 194 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 HCAR2Q8TDS4 363 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZFP90Q8TF47 636 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 VPS35Q96QK1 796 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 FERD3LQ96RJ6 166 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 MROQ9BYG7 248 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 HOXD1Q9GZZ0 328 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 IL17CQ9P0M4 197 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PCDHB1Q9Y5F3 818 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SCN4AP35499 1836 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CLDN25C9JDP6 229 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ARNTLO00327 626 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ADAM12O43184 909 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 STK16O75716 305 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 IGLV3-27P01718 113 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 KRT8P05787 483 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PTPN2P17706 415 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CTGFP29279 349 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms