RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 SAMD4BQ5PRF9 694 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 C10orf62Q5T681 223 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 AMZ2Q86W34 360 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 FAM9CQ8IZT9 166 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 SLC44A3Q8N4M1 653 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 GLB1L3Q8NCI6 653 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 WDR20Q8TBZ3 569 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PYCR2Q96C36 320 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 ASB9Q96DX5 294 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 CMTM7Q96FZ5 175 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 DUS3LQ96G46 650 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 C1orf50Q9BV19 199 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 ATG10Q9H0Y0 220 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 LRTM1Q9HBL6 345 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 MBNL1Q9NR56 388 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 TMED5Q9Y3A6 229 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 LRRC42Q9Y546 428 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PIAS3Q9Y6X2 628 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 REV3LO60673 3130 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 SHISA7A6NL88 538 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 CFLARO15519 480 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 KLF8O95600 359 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 PCCBP05166 539 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 ERGP11308 486 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 G6PDP11413 515 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 PRPS2P11908 318 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 MYCLP1P12525 358 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 HSD17B1P14061 328 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 ITPKAP23677 461 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 ADPRHP54922 357 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 MS4A2Q01362 244 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
LMO1-201ENST00000335790 SFSWAPQ12872 951 aaKnown RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 NAE1Q13564 534 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 NFE2L1Q14494 772 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 PON2Q15165 354 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 IRF4Q15306 451 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 CPSF6Q16630 551 aaKnown RBP eCLIP13.09□□□□□ -0.31
LMO1-201ENST00000335790 IMPG1Q17R60 797 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 FBXO43Q4G163 708 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 IRAK1BP1Q5VVH5 260 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 FRG2Q64ET8 278 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 FAM83HQ6ZRV2 1179 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 CCDC124Q96CT7 223 aaKnown RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 LRRC58Q96CX6 371 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 SCARF2Q96GP6 870 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 FRG2BQ96QU4 278 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 HHIPQ96QV1 700 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 TIMM29Q9BSF4 260 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 LGR4Q9BXB1 951 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 EHD1Q9H4M9 534 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 WDR26Q9H7D7 661 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 BRF2Q9HAW0 419 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 PHPT1Q9NRX4 125 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 TMEM98Q9Y2Y6 226 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
LMO1-201ENST00000335790 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
LMO1-201ENST00000335790 C15orf38-AP3S2A0A0A6YYH1 394 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 PRORSD1PA6NEY8 169 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 CCDC154A6NI56 674 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 H3BNX3 289 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 CLGNO14967 610 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 MAP3K7O43318 606 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
LMO1-201ENST00000335790 SLC2A4P14672 509 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 CD22P20273 847 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 SLC6A2P23975 617 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
LMO1-201ENST00000335790 VHLP40337 213 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
LMO1-201ENST00000335790 NME5P56597 212 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 RPL38P63173 70 aaKnown RBP13.08□□□□□ -0.32
LMO1-201ENST00000335790 HMGCS1Q01581 520 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 IRF8Q02556 426 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 SMAD4Q13485 552 aaKnown RBP13.08□□□□□ -0.32
LMO1-201ENST00000335790 DOC2AQ14183 400 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 FLOT2Q14254 428 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 INPP5AQ14642 412 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 ARHGAP19Q14CB8 494 aa13.08□□□□□ -0.32
LMO1-201ENST00000335790 CCDC6Q16204 474 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms