RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SETMARQ53H47 684 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 SOWAHCQ53LP3 525 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ZRANB3Q5FWF4 1079 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 GPR149Q86SP6 731 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 GALNT10Q86SR1 603 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 GALNT13Q8IUC8 556 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ANKHQ9HCJ1 492 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 C14orf119Q9NWQ9 140 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 QPCTLQ9NXS2 382 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 NOD1Q9Y239 953 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 MED16Q9Y2X0 877 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 SNX8Q9Y5X2 465 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 MYLKQ15746 1914 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 METTL15A6NJ78 407 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 CENPXA8MT69 81 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 IQCF5A8MTL0 148 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 RAMP2O60895 175 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ASGR1P07306 291 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 SERPINF2P08697 491 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 PKMP14618 531 aaKnown RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ACVR2AP27037 513 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 MAD2L1BPQ15013 274 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ZFP69Q49AA0 526 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 OR2T5Q6IEZ7 315 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 SHQ1Q6PI26 577 aaKnown RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 OR2T29Q8NH02 315 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 MTFMTQ96DP5 389 aaKnown RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 CHCHD6Q9BRQ6 235 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 WBP11Q9Y2W2 641 aaKnown RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 PABPN1LA6NDY0 278 aaKnown RBP13.4□□□□□ -0.26
SYNE3-201ENST00000334258 IGLV3-25P01717 112 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RETP07949 1114 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 SLC10A3P09131 477 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 HOXD10P28358 340 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 PPP3CCP48454 512 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CCDC58Q4VC31 144 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 AFMIDQ63HM1 303 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 TUBA3EQ6PEY2 450 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 GLT6D1Q7Z4J2 308 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 MIB1Q86YT6 1006 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 UMODL1-AS1Q8N2C9 162 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 EFHBQ8N7U6 833 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RPRD1AQ96P16 312 aaPredicted RBP13.4□□□□□ -0.26
SYNE3-201ENST00000334258 EGFL8Q99944 293 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RNF167Q9H6Y7 350 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CSNK1G1Q9HCP0 422 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 BPIFA1Q9NP55 256 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 OSER1Q9NX31 292 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 EHD3Q9NZN3 535 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ABCG2Q9UNQ0 655 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 OR2A25A4D2G3 310 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 FAM172BPA6NC97 362 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 AGRPO00253 132 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ANKRD28O15084 1053 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ICMTO60725 284 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 BRCC3P46736 316 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 HSPA7P48741 367 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CXCR4P61073 352 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF45Q02386 682 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 GTF2H2Q13888 395 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 KCNA10Q16322 511 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 SDHAF4Q5VUM1 108 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 AGAP6Q5VW22 663 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 GTF2H2CQ6P1K8 395 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 PNCKQ6P2M8 343 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 GOLGA7Q7Z5G4 137 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 EGLN2Q96KS0 407 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 AGAP4Q96P64 663 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 SMIM14Q96QK8 99 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 OR2B2Q9GZK3 357 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 NMUR1Q9HB89 426 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 BTBD3Q9Y2F9 522 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 UGT2A1Q9Y4X1 527 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CDK2AP1O14519 115 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 HAT1O14929 419 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RGS14O43566 566 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 AKR1A1P14550 325 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RHOQP17081 205 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CD52P31358 61 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RACK1P63244 317 aaKnown RBP13.4□□□□□ -0.26
SYNE3-201ENST00000334258 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
SYNE3-201ENST00000334258 CREMQ03060 361 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 MSRB3Q8IXL7 192 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ASCC1Q8N9N2 400 aaKnown RBP13.4□□□□□ -0.26
SYNE3-201ENST00000334258 EXOC2Q96KP1 924 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 Q96MT0 163 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 APOL5Q9BWW9 433 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 ROGDIQ9GZN7 287 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 MAGIXQ9H6Y5 334 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 PRM3Q9NNZ6 103 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 SLC6A13Q9NSD5 602 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 TMEM45AQ9NWC5 275 aa13.4□□□□□ -0.26
SYNE3-201ENST00000334258 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms