RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 GZMMP51124 257 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 VBP1P61758 197 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 IFITM3Q01628 133 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 MTA1Q13330 715 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 NFATC2Q13469 925 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 TAF12Q16514 161 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 TMEM236Q5W0B7 351 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 RFLNAQ6ZTI6 216 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ADHFE1Q8IWW8 467 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZBTB2Q8N680 514 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 OR5K1Q8NHB7 308 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 MCOLN3Q8TDD5 553 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 MYO19Q96H55 970 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 CPPED1Q9BRF8 314 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 GNPTGQ9UJJ9 305 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 TMEM247A6NEH6 219 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 IFRD1O00458 451 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SERPINB7O75635 380 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SCELO95171 688 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SEC24AO95486 1093 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ANGPTL1O95841 491 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 IL6P05231 212 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 CD6P30203 668 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 CSKP41240 450 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 NRIP1P48552 1158 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 TUFMP49411 452 aaKnown RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 PLD1Q13393 1074 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SF1Q15637 639 aaKnown RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ADPRMQ3LIE5 342 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 DOK6Q6PKX4 331 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 VTCN1Q7Z7D3 282 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 B3GNT8Q7Z7M8 397 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SLCO6A1Q86UG4 719 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 APCDD1Q8J025 514 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZCCHC7Q8N3Z6 543 aaKnown RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 SVOPLQ8N434 492 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 EBPLQ9BY08 206 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZFYVE1Q9HBF4 777 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 PARVBQ9HBI1 364 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 C1orf109Q9NX04 203 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 C3orf18Q9UK00 162 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 PCDHB1Q9Y5F3 818 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 DOCK6Q96HP0 2047 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 BNIP3LO60238 219 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 EPB42P16452 691 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 BPIP17213 487 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 IGFBP5P24593 272 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 PTPN6P29350 595 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 GSSP48637 474 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 VEGFBP49765 207 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 RGS4P49798 205 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 RPS14P62263 151 aaKnown RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 LRRC73Q5JTD7 316 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 GPRC6AQ5T6X5 926 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 OR4F3Q6IEY1 312 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZDHHC21Q8IVQ6 265 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 TMEM45AQ9NWC5 275 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 DAPK2Q9UIK4 370 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 CRLS1Q9UJA2 301 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 ZBBXA8MT70 800 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF99A8MXY4 864 aaPredicted RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 SLC28A1O00337 649 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 UGT2B11O75310 529 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 PGLSO95336 258 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 HMGA1P17096 107 aaKnown RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 DGKAP23743 735 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 HNF1BP35680 557 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 MASP1P48740 699 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 CLK3P49761 638 aaKnown RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 DAPP51397 102 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 ZXDBP98169 803 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 GBX1Q14549 363 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 CPZQ66K79 652 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 TRIM46Q7Z4K8 759 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 CALHM3Q86XJ0 350 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 RBFAQ8N0V3 343 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 AADATQ8N5Z0 425 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 SKA2Q8WVK7 121 aaPredicted RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 SELENOMQ8WWX9 145 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 RPL3LQ92901 407 aaKnown RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 APIPQ96GX9 242 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 PYURFQ96I23 114 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 MAGED4Q96JG8 741 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 RDH12Q96NR8 316 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 TTLL2Q9BWV7 592 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 RASSF1Q9NS23 344 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 MTRRQ9UBK8 725 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 BLOC1S6Q9UL45 172 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 ERVK-11Q9UQG0 969 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 PLXNB3Q9ULL4 1909 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 SOBPA7XYQ1 873 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 SH3BGRLO75368 114 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 STK16O75716 305 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 FADS2O95864 444 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms