RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 TMED4Q7Z7H5 227 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 TAC4Q86UU9 113 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 ZNF227Q86WZ6 799 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 LSM14AQ8ND56 463 aaKnown RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 OR8K3Q8NH51 312 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 MSLNLQ96KJ4 702 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 OR51B6Q9H340 312 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 CCDC59Q9P031 241 aaKnown RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 GNG8Q9UK08 70 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 FADS3Q9Y5Q0 445 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 URB1O60287 2271 aaKnown RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 ATF4P18848 351 aaPredicted RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 LAPTM5Q13571 262 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 FSTL5Q8N475 847 aaPredicted RBP10.36□□□□□ -0.75
CLN8-201ENST00000331222 MR1Q95460 341 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 SLC38A4Q969I6 547 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 RHOJQ9H4E5 214 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 SP140LQ9H930 580 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 SERINC1Q9NRX5 453 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 USP31Q70CQ4 1352 aa10.36□□□□□ -0.75
CLN8-201ENST00000331222 SMCO3A2RU48 225 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 M0R036 132 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 POTEHQ6S545 545 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SLC26A9Q7LBE3 791 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ZNF676Q8N7Q3 588 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 LRMDAQ9H2I8 198 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 AMBNQ9NP70 447 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PNPLA3Q9NST1 481 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 MAGEL2Q9UJ55 1249 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 MAU2Q9Y6X3 613 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 IRS2Q9Y4H2 1338 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 OR2AT4A6NND4 320 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 BLKP51451 505 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ARPC4P59998 168 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PLET1Q6UQ28 207 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 Q6ZVU0 165 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PHF13Q86YI8 300 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 OR13C4Q8NGS5 318 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 LPGAT1Q92604 370 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 KREMEN1Q96MU8 473 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PKP4Q99569 1192 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 TM9SF2Q99805 663 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 MEN1O00255 615 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 LSM1O15116 133 aaKnown RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 SNX3O60493 162 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 BCHEP06276 602 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 DRD4P21917 467 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 TEAD2Q15562 447 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ARL13AQ5H913 290 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 CDKL4Q5MAI5 379 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 TMEM192Q8IY95 271 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 OR2T34Q8NGX1 318 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 OR2T3Q8NH03 318 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ART4Q93070 314 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 RADILQ96JH8 1075 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 MIPEPQ99797 713 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SLC35A5Q9BS91 424 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 KCNK6Q9Y257 313 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 RWDD3Q9Y3V2 267 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PCDHB3Q9Y5E6 796 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 OR14I1A6ND48 311 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 KLK3P07288 261 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 SPATA31C1P0DKV0 1188 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ADRA1BP35368 520 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SLBPQ14493 270 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLN8-201ENST00000331222 LCN1P1Q5VSP4 162 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 GDPD4Q6W3E5 623 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ZDHHC21Q8IVQ6 265 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 IL4I1Q96RQ9 567 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 RTKNQ9BST9 563 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 UCK2Q9BZX2 261 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SLC6A15Q9H2J7 730 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SPATA6Q9NWH7 488 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 HIF3AQ9Y2N7 669 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 HEBP2Q9Y5Z4 205 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 PTCH2Q9Y6C5 1203 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 NIPSNAP2O75323 286 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 MPP2Q14168 576 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ZNF542PQ5EBM4 170 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ARSHQ5FYA8 562 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 HERC2P3Q9BVR0 1158 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 RIOK2Q9BVS4 552 aaKnown RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 FZD3Q9NPG1 666 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 ERI3O43414 337 aaKnown RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 PCDH7O60245 1069 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 UNC5CO95185 931 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 HOXB8P17481 243 aaPredicted RBP10.35□□□□□ -0.75
CLN8-201ENST00000331222 KHKP50053 298 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 SLC10A7Q0GE19 358 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 CRHR2Q13324 411 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 NNATQ16517 81 aa10.35□□□□□ -0.75
CLN8-201ENST00000331222 DQX1Q8TE96 717 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms