RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PRAMEF27A3QJZ7 478 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 A8MU76 341 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 C2orf74A8MZ97 194 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 H3BMM5 538 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PFDN6O15212 129 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ZSCAN12O43309 604 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SPAG6O75602 509 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RASSF9O75901 435 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 FGGP02679 453 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 APRTP07741 180 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LIFP15018 202 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TYRP1P17643 537 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TPH1P17752 444 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ACADLP28330 430 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PBLDP30039 288 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 ATP5DP30049 168 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LEPRP48357 1165 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 PPM1FP49593 454 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 PRAMEP78395 509 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 CDC20Q12834 499 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TUBB3Q13509 450 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TGIF1Q15583 401 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LINC00303Q3SY05 128 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 FASTKD1Q53R41 847 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 FAM182AQ5T1J6 154 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RNF187Q5TA31 235 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 IRGCQ6NXR0 463 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LRRC8BQ6P9F7 803 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 C6orf15Q6UXA7 325 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 UNC5DQ6UXZ4 953 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ZNF517Q6ZMY9 492 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 DET1Q7L5Y6 550 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TAS2R42Q7RTR8 314 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 UBE3DQ7Z6J8 389 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LMNTD2Q8IXW0 634 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 CFAP206Q8IYR0 622 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SLC22A15Q8IZD6 547 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ZNF843Q8N446 348 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 MCUQ8NE86 351 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 OR5K2Q8NHB8 316 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ACTRT1Q8TDG2 376 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 GRK7Q8WTQ7 553 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 C1orf54Q8WWF1 131 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ASZ1Q8WWH4 475 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LCN9Q8WX39 176 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 TFGQ92734 400 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 SLCO2A1Q92959 643 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 HDAC10Q969S8 669 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PANX3Q96QZ0 392 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 OR6C1Q96RD1 312 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 DPH2Q9BQC3 489 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 RAB11FIP5Q9BXF6 653 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 GPR87Q9BY21 358 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ULBP3Q9BZM4 244 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 SRMSQ9H3Y6 488 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 GPN2Q9H9Y4 310 aaPredicted RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 FANCEQ9HB96 536 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 LZTFL1Q9NQ48 299 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 STARD5Q9NSY2 213 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 IMP3Q9NV31 184 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 HRASLS2Q9NWW9 162 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 KLHL42Q9P2K6 505 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 ANAPC5Q9UJX4 755 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 RALYQ9UKM9 306 aaKnown RBP6.14□□□□□ -1.43
SMG1-201ENST00000330588 PPT2Q9UMR5 302 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PSMD13Q9UNM6 376 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 COMMD10Q9Y6G5 202 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 PTPRQQ9UMZ3 2332 aa6.14□□□□□ -1.43
SMG1-201ENST00000330588 IGHV5-51A0A0C4DH38 117 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 MAGEB16A2A368 324 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 OR6C74A6NCV1 312 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 PRMT5O14744 637 aaPredicted RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 DNAJA2O60884 412 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 GPC4O75487 556 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 SLCO2B1O94956 709 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 GOT2P00505 430 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 CD63P08962 238 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 HBQ1P09105 142 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 RAB40ALP0C0E4 278 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 PAMP19021 973 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 OGNP20774 298 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 AOAHP28039 575 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 FNTAP49354 379 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 CDKN1CP49918 316 aaPredicted RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 KPNA2P52292 529 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 TMPRSS15P98073 1019 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 CLCQ05315 142 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KRT33BQ14525 404 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KCNJ11Q14654 390 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KIR2DS3Q14952 304 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 NAA25Q14CX7 972 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 TMED2Q15363 201 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 ZRSR2Q15696 482 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 TBR1Q16650 682 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KYNUQ16719 465 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 SLC5A12Q1EHB4 618 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 TYSND1Q2T9J0 566 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 ZBTB37Q5TC79 503 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KIAA1614Q5VZ46 1190 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms