RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 A0A1B0GX78 115 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FITM1A5D6W6 292 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 NRDCO43847 1150 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 CEP104O60308 925 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 VAPBO95292 243 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 MATN4O95460 622 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 ALBP02768 609 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FOLR3P41439 243 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 SOX8P57073 446 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 NAA25Q14CX7 972 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 NKAIN1Q4KMZ8 207 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FCRL6Q6DN72 434 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FIGLAQ6QHK4 219 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 MRGPREQ86SM8 312 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 MCATQ8IVS2 390 aaKnown RBP13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 LMNTD1Q8N9Z9 388 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 GALNT11Q8NCW6 608 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 CFAP61Q8NHU2 1237 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 PTERQ96BW5 349 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 FOPNLQ96NB1 174 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 NUDT9Q9BW91 350 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 SLC26A1Q9H2B4 701 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 GPR83Q9NYM4 423 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 IFT80Q9P2H3 777 aaPredicted RBP13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 DHCR7Q9UBM7 475 aaKnown RBP13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 SLC39A10Q9ULF5 831 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 PLAAQ9Y263 795 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 VPS9D1Q9Y2B5 631 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 HIVEP3Q5T1R4 2406 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 CNTRLQ7Z7A1 2325 aa13.04□□□□□ -0.32
GTF3C6-201ENST00000329970 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 MAGEB16A2A368 324 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 SRPX2O60687 465 aaPredicted RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CTSBP07858 339 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 ERGP11308 486 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 PIM1P11309 404 aaPredicted RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 PAMP19021 973 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 VARSP26640 1264 aaKnown RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 GRIA3P42263 894 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 MLLT10P55197 1068 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 GRM7Q14831 915 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CYP1B1Q16678 543 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 VWA5B1Q5TIE3 1220 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 FAM69BQ5VUD6 431 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 MLIPQ5VWP3 458 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CILP2Q8IUL8 1156 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 MCUQ8NE86 351 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 IL17FQ96PD4 163 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 WDR54Q9H977 334 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 SLC22A11Q9NSA0 550 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 INTS10Q9NVR2 710 aaKnown RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 KLHL42Q9P2K6 505 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 ANKMY1Q9P2S6 941 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 PTRH2Q9Y3E5 179 aaKnown RBP13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 MAP4K5Q9Y4K4 846 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 NFS1Q9Y697 457 aa13.03□□□□□ -0.32
GTF3C6-201ENST00000329970 FAM237BA0A1B0GVD1 139 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 A0A1W2PPV9 198 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 DSCR3O14972 297 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 ZNF185O15231 689 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 UMODP07911 640 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 CXCR5P32302 372 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.334e-7■□□□□ 8.4
GTF3C6-201ENST00000329970 ARHGAP19Q14CB8 494 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 NADK2Q4G0N4 442 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 DCAF10Q5QP82 559 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 C1orf189Q5VU69 101 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 JMJD6Q6NYC1 403 aaPredicted RBP13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 IGFL3Q6UXB1 125 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 OVCH1Q7RTY7 1134 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 LMNTD2Q8IXW0 634 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 OR2A1Q8NGT9 310 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 CPT1CQ8TCG5 803 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 PNPLA2Q96AD5 504 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 PBKQ96KB5 322 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 NAP1L3Q99457 506 aaPredicted RBP13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 XAB2Q9HCS7 855 aaKnown RBP13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 CUTCQ9NTM9 273 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 IRAK4Q9NWZ3 460 aa13.02□□□□□ -0.33
GTF3C6-201ENST00000329970 TTLL8A6PVC2 850 aa13.01□□□□□ -0.33
GTF3C6-201ENST00000329970 PEX12O00623 359 aa13.01□□□□□ -0.33
GTF3C6-201ENST00000329970 PHF2O75151 1096 aa13.01□□□□□ -0.33
GTF3C6-201ENST00000329970 NIPSNAP2O75323 286 aa13.01□□□□□ -0.33
GTF3C6-201ENST00000329970 VPS4BO75351 444 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms