RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ILF3Q12906 894 aaKnown RBP eCLIP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 C1orf61Q13536 156 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 HERC3Q15034 1050 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 PRRT3Q5FWE3 981 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 TTC23LQ6PF05 361 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 RP9Q8TA86 221 aaKnown RBP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 UBTD2Q8WUN7 234 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 CATSPER2Q96P56 530 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 PFDN4Q9NQP4 134 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 SNX11Q9Y5W9 270 aa18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 TDRD6O60522 2096 aaKnown RBP18.23■□□□□ 0.51
EXOSC3-201ENST00000327304 ARHGEF33A8MVX0 844 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 SLC16A5O15375 505 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 VPS4BO75351 444 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 PSIP1O75475 530 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CTSEP14091 401 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 EZRP15311 586 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CPOXP36551 454 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 BDKRB1P46663 353 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 SP140Q13342 867 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 TMEM198Q66K66 360 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CAPRIN2Q6IMN6 1127 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 GPRIN3Q6ZVF9 776 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 SYVN1Q86TM6 617 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 PACS2Q86VP3 889 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 HOMEZQ8IX15 550 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 FAM13CQ8NE31 585 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CCT7Q99832 543 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 RTKNQ9BST9 563 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 LRFN3Q9BTN0 628 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 SLC12A9Q9BXP2 914 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 PDE10AQ9Y233 779 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 COPG1Q9Y678 874 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CFAP20Q9Y6A4 193 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 ANKRD12Q6UB98 2062 aa18.22■□□□□ 0.51
EXOSC3-201ENST00000327304 CRCPO75575 148 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 WFS1O76024 890 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ATP6V1G2O95670 118 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 CHEK2O96017 543 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ATP4BP51164 291 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 FOXA1P55317 472 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 IRX1P78414 480 aaPredicted RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 MXRA7P84157 204 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 CLCA4Q14CN2 919 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 RBBP7Q16576 425 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 FBXO48Q5FWF7 155 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 DUS1LQ6P1R4 473 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 MBOAT1Q6ZNC8 495 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 POU5F2Q8N7G0 328 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 RHBDF1Q96CC6 855 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 FOPNLQ96NB1 174 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 INSM2Q96T92 566 aaPredicted RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 EGFL8Q99944 293 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 GSDMCQ9BYG8 508 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 FSCN3Q9NQT6 498 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ASB1Q9Y576 335 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 PI4KAP42356 2102 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 UBDO15205 165 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TAPBPO15533 448 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ANXA5P08758 320 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 HNRNPH1P31943 449 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 PGM1P36871 562 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 SQLEQ14534 574 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 UAP1L1Q3KQV9 507 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 CCSMST1Q4G0I0 132 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 WASHC2DQ5SRD0 308 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 GOLGA7Q7Z5G4 137 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TAF8Q7Z7C8 310 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TCAIMQ8N3R3 496 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 PHC3Q8NDX5 983 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 FBXO27Q8NI29 283 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TFGQ92734 400 aaPredicted RBP18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ESAMQ96AP7 390 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TRIM54Q9BYV2 358 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 CD244Q9BZW8 370 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 PARVBQ9HBI1 364 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 TAAR2Q9P1P5 351 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 CIDEBQ9UHD4 219 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 ZNF225Q9UK10 706 aa18.21■□□□□ 0.51
EXOSC3-201ENST00000327304 A6NCN8 305 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 OR52A4PA6NMU1 304 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 PATE3B3GLJ2 98 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 IFRD1O00458 451 aaPredicted RBP18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 PIP5K1BO14986 540 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 GUCA1CO95843 209 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 CFIP05156 583 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 HOXD12P35452 270 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 RPIAP49247 311 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 RAP1GDS1P52306 607 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 GTF2H2Q13888 395 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 SNCBQ16143 134 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 GTF2H2CQ6P1K8 395 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 UNC5DQ6UXZ4 953 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 OR5AR1Q8NGP9 310 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 LMX1AQ8TE12 382 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 C3orf30Q96M34 536 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 C12orf66Q96MD2 445 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 ERVMER34-1Q9H9K5 563 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms