RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TXNL4AP83876 142 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 MAD2L1Q13257 205 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 TAF1AQ15573 450 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 RNASE12Q5GAN4 147 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 TPRG1LQ5T0D9 272 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TXNDC11Q6PKC3 985 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SERPINA13PQ6UXR4 307 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 LMNTD1Q8N9Z9 388 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TFAP2CQ92754 450 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 CAPNS2Q96L46 248 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 RPLP2P05387 115 aaKnown RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 RAP2AP10114 183 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 HLCSP50747 726 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 AKR1D1P51857 326 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 CACNG1Q06432 222 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SKIV2LQ15477 1246 aaKnown RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 ATAD3BQ5T9A4 648 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 CFAP206Q8IYR0 622 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TTC29Q8NA56 475 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 VANGL1Q8TAA9 524 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 MKS1Q9NXB0 559 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 ERVK-18Q9QC07 812 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 BOLA1Q9Y3E2 137 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 PCDHGA3Q9Y5H0 932 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SYN3O14994 580 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 MUSKO15146 869 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 PRAMEF11O60813 436 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 KERAO60938 352 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TRBC1P01850 177 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 GPR1P46091 355 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 GTDC1Q4AE62 458 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 CLLU1OSQ5K130 101 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 C6orf141Q5SZD1 244 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 OR4F3Q6IEY1 312 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 ELMSAN1Q6PJG2 1045 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 C16orf62Q7Z3J2 963 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 ANKRD13BQ86YJ7 626 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 PACRGLQ8N7B6 248 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 OR5AK3PQ8NH89 298 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TSGA13Q96PP4 275 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TP63Q9H3D4 680 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 SGK2Q9HBY8 427 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SLCO3A1Q9UIG8 710 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 DNMT3AQ9Y6K1 912 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 COL4A5P29400 1685 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SERPINB7O75635 380 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 ELFN1P0C7U0 828 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 OR4D2P58180 307 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SCAPQ12770 1279 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 SF1Q15637 639 aaKnown RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 SLC34A3Q8N130 599 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 TMEM102Q8N9M5 508 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 PAQR5Q9NXK6 330 aaPredicted RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 ZNF222Q9UK12 451 aa14.91□□□□□ -0.02
VARS2-201ENST00000321897 MRPS23Q9Y3D9 190 aaKnown RBP14.91□□□□□ -0.02
VARS2-201ENST00000321897 OR6C70A6NIJ9 312 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 SPAM1P38567 509 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 NCF4Q15080 339 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 SF3B4Q15427 424 aaKnown RBP eCLIP14.9□□□□□ -0.024e-7■■■□□ 18.3
VARS2-201ENST00000321897 TYSND1Q2T9J0 566 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 C6orf136Q5SQH8 315 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.9□□□□□ -0.02
VARS2-201ENST00000321897 CCBE1Q6UXH8 406 aaPredicted RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 ZDHHC21Q8IVQ6 265 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 GPR65Q8IYL9 337 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 ACDQ96AP0 544 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 SPRTNQ9H040 489 aaPredicted RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 ZNF624Q9P2J8 865 aaPredicted RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 ZNF451Q9Y4E5 1061 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 LOC100130705A0A1B0GUX0 176 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 SLC22A1O15245 554 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 EOMESO95936 686 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 ESR1P03372 595 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 PTNP21246 168 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 MEF2AQ02078 507 aaPredicted RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 NOGQ13253 232 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 OTUD1Q5VV17 481 aaPredicted RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 TMEM126BQ8IUX1 230 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 TCAIMQ8N3R3 496 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 TFB2MQ9H5Q4 396 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 FARSBQ9NSD9 589 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 SNTG1Q9NSN8 517 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 TMEM248Q9NWD8 314 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 SLC22A2O15244 555 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 CLDN9O95484 217 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 C8AP07357 584 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 GALTP07902 379 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 PTGER3P43115 390 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 CTSKP43235 329 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 PREPP48147 710 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 LEPRP48357 1165 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 ERVK-8P63133 956 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 GPR17Q13304 367 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 C1DQ13901 141 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 PDE12Q6L8Q7 609 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 TSPAN33Q86UF1 283 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 WDR36Q8NI36 951 aaKnown RBP14.9□□□□□ -0.02
VARS2-201ENST00000321897 FAM110BQ8TC76 370 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms