RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CRYBB1P53674 252 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 GALNT10Q86SR1 603 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 CALHM3Q86XJ0 350 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 SPATA2LQ8IUW3 424 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 ZNF683Q8IZ20 524 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 CLMPQ9H6B4 373 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 HOXB6P17509 224 aaKnown RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 GNPDA1P46926 289 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 SERINC3Q13530 473 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 MFSD10Q14728 455 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 SPANXN2Q5MJ10 180 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 ZNF544Q6NX49 715 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 FBXL22Q6P050 247 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 TMEM132CQ8N3T6 1108 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 ASCC1Q8N9N2 400 aaKnown RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 OR6F1Q8NGZ6 308 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 FCGR1BQ92637 280 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 RPRD1AQ96P16 312 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 CPPED1Q9BRF8 314 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 IL1RAPQ9NPH3 570 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 C14orf119Q9NWQ9 140 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 RIMKLBQ9ULI2 386 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 SNX6Q9UNH7 406 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 WBP11Q9Y2W2 641 aaKnown RBP17.45■□□□□ 0.38
PRKCB-202ENST00000321728 ACTL7AQ9Y615 435 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 DOCK4Q8N1I0 1966 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 DOCK3Q8IZD9 2030 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 C2orf81A6NN90 581 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 CENPBD1B2RD01 187 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 POMCP01189 267 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 RPLP0P05388 317 aaKnown RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 FPR1P21462 350 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 MC4RP32245 332 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 PCBP2Q15366 365 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 SUSD1Q6UWL2 747 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 MDGA1Q8NFP4 955 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 KBTBD8Q8NFY9 601 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 APH1BQ8WW43 257 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 Q96MT0 163 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 INPP5KQ9BT40 448 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 BPIFA1Q9NP55 256 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 CCDC177Q9NQR7 707 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 FKBPLQ9UIM3 349 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 VPS9D1Q9Y2B5 631 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 TRBV5-3A0A0A0MS03 114 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ARL5CA6NH57 179 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ERN1O75460 977 aaKnown RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 HMBSP08397 361 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 OR4Q2P0C623 313 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 GRK5P34947 590 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 TTPAP49638 278 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 GZMMP51124 257 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 RACK1P63244 317 aaKnown RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 TSPY1Q01534 308 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ELP6Q0PNE2 266 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 EFEMP1Q12805 493 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 NPRL3Q12980 569 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ZFP69Q49AA0 526 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ENTHD1Q8IYW4 607 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 CHAC2Q8WUX2 184 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ZBED2Q9BTP6 218 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 LRTM1Q9HBL6 345 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ADARB2Q9NS39 739 aaKnown RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 FBXL12Q9NXK8 326 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 RAPGEFL1Q9UHV5 662 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ZNF490Q9ULM2 529 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 A3GALT2U3KPV4 340 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 COL4A4P53420 1690 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 A8MV72 311 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 ULK1O75385 1050 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 CCNDBP1O95273 360 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 FKBP9O95302 570 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 B3GALT4O96024 378 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 FABP3P05413 133 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 MZF1P28698 734 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 UPP1Q16831 310 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 GPR142Q7Z601 462 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 VTCN1Q7Z7D3 282 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 MTFMTQ96DP5 389 aaKnown RBP17.44■□□□□ 0.38
PRKCB-202ENST00000321728 EXOC2Q96KP1 924 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 DMRTB1Q96MA1 342 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 SIGLEC11Q96RL6 698 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 CHCHD6Q9BRQ6 235 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 OR51E2Q9H255 320 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 PEX16Q9Y5Y5 336 aa17.44■□□□□ 0.38
PRKCB-202ENST00000321728 NUP214P35658 2090 aaPredicted RBP17.43■□□□□ 0.38
PRKCB-202ENST00000321728 TNFRSF10BO14763 440 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 VIPP01282 170 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 GDF5P43026 501 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 FAM171A1Q5VUB5 890 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 GPR153Q6NV75 609 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 DOK6Q6PKX4 331 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 MIB1Q86YT6 1006 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 SLC39A13Q96H72 371 aa17.43■□□□□ 0.38
PRKCB-202ENST00000321728 DEPDC7Q96QD5 511 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms