RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CAPS2Q9BXY5 557 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 PCBD2Q9H0N5 130 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 ATG10Q9H0Y0 220 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 NCDNQ9UBB6 729 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 CIDEBQ9UHD4 219 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 STK38LQ9Y2H1 464 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 ASB1Q9Y576 335 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 TRIM38O00635 465 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 PPM1DO15297 605 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 NUDT21O43809 227 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 CCNT2O60583 730 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 WDR47O94967 919 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 GDF5P43026 501 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 ABCE1P61221 599 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 TBPL1P62380 186 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 CLCQ05315 142 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 GTF2H2Q13888 395 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 PLCL1Q15111 1095 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 INAVAQ3KP66 663 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 CES4AQ5XG92 561 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 GTF2H2CQ6P1K8 395 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 THOC6Q86W42 341 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 LINC01555Q8NAE3 123 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 ESAMQ96AP7 390 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 MIPEPQ99797 713 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 SRMSQ9H3Y6 488 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 CCDC177Q9NQR7 707 aaPredicted RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 SEMA4GQ9NTN9 838 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 DNAJC11Q9NVH1 559 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 INTS7Q9NVH2 962 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 ASCC3Q8N3C0 2202 aaKnown RBP13.17□□□□□ -0.3
PRPF18-201ENST00000320054 RP1P56715 2156 aa13.17□□□□□ -0.3
PRPF18-201ENST00000320054 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PRICKLE3O43900 615 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-201ENST00000320054 KATNA1O75449 491 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 MLYCDO95822 493 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PNLIPP16233 465 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 GLB1P16278 677 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 EPB42P16452 691 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 GPR3P46089 330 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 SLC1A6P48664 564 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 EPHA4P54764 986 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 OCRLQ01968 901 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PCDH1Q08174 1060 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 LCP2Q13094 533 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 BIRC2Q13490 618 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 FASTKQ14296 549 aaKnown RBP13.16□□□□□ -0.3
PRPF18-201ENST00000320054 NR1D2Q14995 579 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 SF3A2Q15428 464 aaKnown RBP13.16□□□□□ -0.3
PRPF18-201ENST00000320054 FBXO48Q5FWF7 155 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 ADGRF3Q8IZF5 1079 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 LSMEM2Q8N112 164 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 TEX9Q8N6V9 391 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PPFIBP2Q8ND30 876 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 OR4E2Q8NGC2 313 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PYCR2Q96C36 320 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 MED8Q96G25 268 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 HAUS8Q9BT25 410 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 EML4Q9HC35 981 aaKnown RBP13.16□□□□□ -0.3
PRPF18-201ENST00000320054 ZBTB26Q9HCK0 441 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 SLC22A14Q9Y267 594 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
PRPF18-201ENST00000320054 ANGPTL3Q9Y5C1 460 aa13.16□□□□□ -0.3
PRPF18-201ENST00000320054 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 SRRM3A6NNA2 597 aaPredicted RBP13.15□□□□□ -0.3
PRPF18-201ENST00000320054 RHPN2P1A8MT19 583 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 TCP11X1B4DZS4 312 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
PRPF18-201ENST00000320054 FLRT2O43155 660 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
PRPF18-201ENST00000320054 NPPBP16860 134 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 ARRB2P32121 409 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 LSP1P33241 339 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 GRK6P43250 576 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 CDH13P55290 713 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 PKNOX1P55347 436 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 GNGT1P63211 74 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 CDC16Q13042 620 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 NR0B2Q15466 257 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 ARL13AQ5H913 290 aaPredicted RBP13.15□□□□□ -0.3
PRPF18-201ENST00000320054 PRAMEF13Q5VWM6 474 aa13.15□□□□□ -0.3
PRPF18-201ENST00000320054 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms